John watches Elizabeth weaken during Echoes.

Mr and Mrs Sheppard, assassins, good at their job and married, at least until they find out about the other. John/Elizabeth of course.

S/W - Making a better memory after 2x16: The long goodbye

John gets pulled into an alternate reality and sees what should have been. Sparky!

John needs to get something off of his chest and Elizabeth is starting to regret that she ever let him into her office in the first place...ShepWeir

AU. Antarctica is fun! Snow, ice, cold, secret alien bases... What’s not to like? A pre-Atlantis adventure for John and Elizabeth, set before "Rising". John&Elizabeth friendship. Complete.

John finds and Ancient computer 'game' and uses it to take a look at his life.

Gate room crew members observing. And gossiping. Sparky body language

She needed a fighting chance, something to live for

Two years ago he could have done this with his conscience clean, but he couldn’t do it any more. It's an experience that changed the way he makes his decisions.

This story is set nine months after "The reason 27 - I wanted to have a baby".

Elizabeth and Lorne have always been close, thanks to SGA-1's habit of disappearing. What happens when John finds out? Sparky! Wier/Lorne friendship

Sheppard/Weir Letters 9 and 10 - "Still, there are some things that I want to say now, and in the future, things that should be said often and that will not lose any value in repetition."

“Because I know it’s you,” she stated. “I feel safe with you, only with you."

S/W, implied S/J - When the lost return, sappiness ensues - Warning: I write Carson to my phonetics. You have a problem with that, don't read this.

This story explores John Sheppard’s dark side and his desire to be with Elizabeth when he becomes affected by something he ate. The next installment of a year's worth of Sparky stories.

Seven years later, John and Elizabeth are home. The year of sparky stories continues!

It was supposed to be just your average alien celebration… only by morning John Sheppard will be waking up a married man to none other than Doctor Elizabeth Weir.

AU, sometimes it takes almost losing something before we realise how much means to us. ShepWeir and RononTeyla

Sheppard's trying not to think about Elizabeth. More to the point, what he did to her. Spoilers for 'Conversion'. Chapter 2 up. '...for anyone keeping track, this was the second time he’d tried to kill Elizabeth Weir...' Spoilers for 'The Long Goodbye'.

Elizabeth is haunted by John's memory. But is it just a contrivance of her dreams that he's not really dead? Or is it much more?

COMPLETED! SheppardWeir. After a mission goes horribly wrong, John wakes up to find that Elizabeth doesn't exist.

He was alive. She was still in Atlantis. And in the end, that was all that really mattered. JohnElizabeth. Minor spoilers for 3.02

Co Written by Nerwen Aldarion: Someone from John's past arrives on Atlantis and may cause a rift between him and Elizabeth Ronon wants to be with Teyla, but his dead wife's memory continues to haunt him. Shweir TeylaRonon

Stuck in a closet with Vanna White. Er. Sheppard. Poor Elizabeth... Set in the middle of 'Poisoning the Well'.