Sort: Category . Published . Updated . Title . Words . Chapters . Reviews . Status .

1. Here Be Dragons » reviews

Soon after the Nano virus outbreak when tensions between Elizabeth and Major John Sheppard are still thick, Elizabeth finds herself on the mainland with him, helping battle an Ancient experiment come back to menace the Athosian settlement.

Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 6 - Words: 31,171 - Reviews: 42 - Updated: 1-14-12 - Published: 1-12-12 - Elizabeth W. & John S. - Complete

2. Pivot » reviews

In the aftermath of a mission gone horribly wrong, Teyla discovers that all is not as it seems, leaving her to wrestle with what is real and what is not as Atlantis grieves for one of its own. Please read warnings.

Stargate: Atlantis - Rated: T - English - Angst - Chapters: 5 - Words: 19,607 - Reviews: 41 - Published: 10-26-11 - Teyla E. - Complete

3. Target » reviews

Sheppard's team responds to a request by an ally world and quickly discovers that there's more going on than unusual technology scaring local shopkeepers. When John goes missing, it's up to Sam Carter and the rest to get him home safely. COMPLETE

Stargate: Atlantis - Rated: T - English - Chapters: 10 - Words: 31,357 - Reviews: 88 - Updated: 10-5-11 - Published: 9-6-11 - John S. & S. Carter/Sam - Complete

4. Once Upon A Time » reviews

...a certain John Sheppard hit his head. Well, a tree hit his head. In a lightning storm a mile from the stargate. At night. Huddled in a cave with a very befuddled John, his team must figure out how to get him home.

Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 3 - Words: 8,648 - Reviews: 14 - Published: 8-5-11 - John S. - Complete

5. Obsession » reviews

Serving under the famous Lt. Col. John Sheppard isn't quite what new recruit, Alex Weiss, is expecting. When John takes a team of Marines to a boring little island in the middle of a typhoon things get really interesting.

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 7 - Words: 41,674 - Reviews: 51 - Updated: 1-5-11 - Published: 1-4-11 - John S. - Complete

6. Three Embraces reviews

John Sheppard was an island fortress - strong, but distant. He did not invite others to cross the divide, but twice, she had reached for him...

Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 1 - Words: 2,413 - Reviews: 21 - Published: 10-7-10 - Teyla E. & John S. - Complete

7. Shattered » reviews

Sometimes putting the pieces back together makes you stronger. When John comes home from one of those secret and unofficial missions, Nancy knows right away that something is wrong.

Stargate: Atlantis - Rated: T - English - Angst - Chapters: 3 - Words: 11,301 - Reviews: 22 - Published: 7-2-10 - Nancy S. & John S. - Complete

8. Fairest of Them All » reviews

The people of the Pegasus Galaxy find lots of things to celebrate. When John is "invited" to the Festival of the Fair, he finds himself the Guest of Honor...and that's really not a good thing.

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 6 - Words: 25,930 - Reviews: 58 - Updated: 5-24-10 - Published: 5-19-10 - John S. - Complete

9. Major's Day Out » reviews

When Sheppard takes Maj Teldy, Lorne and Vega to explore a frozen wraith outpost, Anne is eager to prove herself. When the mission goes sideways and Sheppard is injured, Anne gets a whole new perspective on trust and what it takes to survive in Pegasus.

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 7 - Words: 30,800 - Reviews: 106 - Updated: 4-23-10 - Published: 4-17-10 - A. Teldy & John S. - Complete

10. Skipping the Angles » reviews

Sheppard and Team land on a violent planet and find themselves caught up in the local Clan's battle for leadership. John is injured, friends are not what they seem, and the jumper won't be back for twelve more hours. Cue action, knives, and thugs.

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 6 - Words: 32,406 - Reviews: 65 - Updated: 1-12-10 - Published: 1-11-10 - John S. - Complete

11. Scavengers » reviews

This is what happens when you let whumpers request a plot: John Sheppard is kidnapped, shot, forced to aid hostile aliens in their campaign to steal Ancient technology...and he doesn't even have to step foot off Atlantis to do it. John's really bad day.

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 9 - Words: 32,040 - Reviews: 128 - Updated: 10-7-09 - Published: 10-1-09 - John S. & Rodney M. - Complete

12. So Be It » reviews

An expedition to a creepy planet brings the team face to face with their own mortality.

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 2 - Words: 7,534 - Reviews: 41 - Published: 8-27-09 - John S. & Teyla E. - Complete

13. Ask Me No Questions » reviews

When the Air Force's Top Secret nuisance off the coast of San Francisco draws the attention of the DHS, Nancy is sent to smooth things out. The last thing she expects is a certain John Sheppard to show up at the meeting - or the Juarez Drug Cartel.

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 12 - Words: 32,924 - Reviews: 232 - Updated: 5-19-09 - Published: 5-10-09 - John S. - Complete

14. The One That Got Away » reviews

Siren is back and has a new game to play with her favorite mortal - John Sheppard. When John falls into a mysterious coma, it is up to Teyla and Ronon to figure out a solution before he is tortured to death in his dreams. Now Complete.

Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Suspense - Chapters: 20 - Words: 52,029 - Reviews: 148 - Updated: 3-5-09 - Published: 2-6-09 - John S. & Teyla E. - Complete

15. My Brother's Keeper » reviews

John Sheppard is exhausted, but when he receives a mysterious email in the middle of the night, he finds himself heading back to Earth to help David Sheppard. That is, if he can even find his brother. And if The Trust doesn't kill him first. Complete

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 31 - Words: 70,062 - Reviews: 384 - Updated: 10-29-08 - Published: 9-15-08 - John S. - Complete

16. 12 Days » reviews

When Sheppard is trapped 48,000 years in the future, 12 days go by on Atlantis. During that time, Rodney and Ronon must search for clues to Sheppard's disappearance while also continuing the hunt for Teyla...without killing each other in the process.

Stargate: Atlantis - Rated: T - English - Chapters: 12 - Words: 27,936 - Reviews: 90 - Updated: 7-11-08 - Published: 6-29-08 - Rodney M. & Ronon D. - Complete

17. Blood is Thicker » reviews

When John is severely injured by an unusual weapon, it may be that only a family member can save his life. And that means David Sheppard must come to Atlantis...IF John's friends can convince him to do it. Now complete.

Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 20 - Words: 49,310 - Reviews: 451 - Updated: 4-14-08 - Published: 3-18-08 - John S. - Complete

18. Sudoku, do you? » reviews

After the midway station is destroyed, Rodney wonders if having Sheppard as a friend is simply too risky. Something of a Tag to Midway.

Stargate: Atlantis - Rated: K - English - Chapters: 2 - Words: 3,999 - Reviews: 27 - Published: 3-13-08 - John S. & Rodney M. - Complete

19. Significant Figures » reviews

Wounded, alone, and pursued by ruthless bandits, John must depend on his team to figure out the clues he's left for them.

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 4 - Words: 17,246 - Reviews: 104 - Updated: 11-17-07 - Published: 11-12-07 - John S. - Complete

20. Things That Go Whump in the Night » reviews

When John is stung by a venomous predator, Teyla must fight her own insecurities to lead her team and negotiate the strange customs of the natives they must depend on to treat him. Can she pull John through the ordeal, or will the venom overwhelm him...

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 6 - Words: 23,650 - Reviews: 112 - Updated: 11-6-07 - Published: 10-29-07 - Teyla E. & John S. - Complete

21. A Rock And A Hard Place » reviews

John Sheppard is who he is. And that usually gets him in trouble. On trial for his actions during a mission gone horribly wrong, his team is forced to testify against him, his superiors have given him up for lost...and where the heck is McKay!

Stargate: Atlantis - Rated: T - English - Angst - Chapters: 13 - Words: 29,337 - Reviews: 106 - Updated: 10-8-07 - Published: 9-24-07 - John S. - Complete

22. Pulling Rank » reviews

When Ronon and an injured Sheppard are stuck on a deserted planet surrounded by Michael's Bug Monsters, Ronon must decide whether to follow Sheppard's lead, or follow his own instincts. In the end, it comes down to trust...

Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 3 - Words: 12,027 - Reviews: 102 - Updated: 9-13-07 - Published: 9-9-07 - Ronon D. & John S. - Complete

23. Descent » reviews

Sheppard finds himself in the hands of terrorists who plague a new ally. Alone, and certain that Atlantis has no idea where he is, John must find a way to escape before he loses all sense of what is real...and what is not.

Stargate: Atlantis - Rated: T - English - Suspense/Hurt/Comfort - Chapters: 13 - Words: 25,245 - Reviews: 84 - Updated: 7-24-07 - Published: 7-16-07 - John S. & Elizabeth W. - Complete

24. As I Lay Dying » reviews

Is Sheppard doomed to die, over and over again for all time? Or can he solve the puzzle of the cursed planet before another bullet takes him...

Stargate: Atlantis - Rated: T - English - Drama - Chapters: 9 - Words: 19,049 - Reviews: 140 - Updated: 6-11-07 - Published: 5-29-07 - John S. - Complete

25. The New Guys » reviews

Elizabeth was looking forward to watching Col. Sheppard win over a new batch of Pegasus Galaxy recruits... When the Wraith disrupt a routine training mission, Sheppard must show the new guys what it takes to get everyone home. Shep whump ensues. COMPLETE

Stargate: Atlantis - Rated: T - English - Chapters: 5 - Words: 17,986 - Reviews: 124 - Updated: 3-11-07 - Published: 3-9-07 - John S. - Complete

26. What Dreams May Come » reviews

After John Sheppard stumbles through the gate, battered and exhausted, holding a cure that will save his team from a deadly plague, Elizabeth is left at his bedside to wonder what he must have gone through during the 3 days he'd been missing.

Stargate: Atlantis - Rated: T - English - Chapters: 9 - Words: 26,535 - Reviews: 40 - Published: 11-10-06 - John S. - Complete

27. A Walk in the Park » reviews

A survey of a pretty planet causes an unusual effect on Sheppard's team. Only Rodney seems unaffected and it's up to him, Elizabeth and Carson to puzzle out the cause and find a solution. Before it's too late for Sheppard. Complete!

Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 9 - Words: 28,967 - Reviews: 65 - Updated: 8-22-06 - Published: 7-25-06 - John S. & Elizabeth W. - Complete

28. War and Peace, The Long Road Home » reviews

When Sheppard and Weir are separated from their team on a hostile planet, a wounded Sheppard is forced to guide her to the stargate alone through deep woods and a gauntlet of enemy soldiers. Shep Whump and JohnEliz friendship.

Stargate: Atlantis - Rated: T - English - Adventure/Drama - Chapters: 11 - Words: 37,206 - Reviews: 42 - Updated: 7-1-06 - Published: 5-29-06 - John S. & Elizabeth W. - Complete

29. shEppard equals MCscrewed » reviews

Rodney must keep John alive until help arrives, and learns about his own strengths in the process. Pure plot device for Shep Whump!

Stargate: Atlantis - Rated: T - English - Chapters: 3 - Words: 5,334 - Reviews: 35 - Published: 6-12-06 - John S. & Rodney M. - Complete

30. When did you decide to become a pilot? reviews

John revisits his past and the moment he knew he wanted to fly. One shot little vignette in which we get to meet John's father, Col. Morris Sheppard and an 11 year old John himself.

Stargate: Atlantis - Rated: K - English - Chapters: 1 - Words: 2,303 - Reviews: 10 - Published: 5-31-06 - John S. - Complete

31. Missing Scene for Conversion, 2nd season reviews

Elizabeth takes a long walk to regain her composure after asking Caldwell to fill in for Sheppard who is fighting the Iratus Bug retrovirus. Hints of ShepWeir.

Stargate: Atlantis - Rated: K+ - English - Angst - Chapters: 1 - Words: 1,612 - Reviews: 12 - Published: 1-12-06 - Elizabeth W. & John S. - Complete