jasminesmommy
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Joined 08-31-06, id: 1125704
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Reflections and Conclusions by Kariesue reviews
John and Teyla get ready to welcome their new child. What does life have in store for them now? The finale of my 'R and ' universe. Begins shortly after 'Recreation and Vindication'.
Stargate: Atlantis - Rated: M - English - Family/Romance - Chapters: 18 - Words: 89,711 - Reviews: 233 - Favs: 58 - Follows: 84 - Updated: 2/2 - Published: 8/10/2013 - John S., Teyla E.
Accidents by godsdaughter77 reviews
John gets in an accident and conflict ensues. John and Rodney both get whumped and its set during the time Elizabeth and Carson still inhabit Atlantis. NOW COMPLETE!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 10 - Words: 43,556 - Reviews: 185 - Favs: 62 - Follows: 106 - Updated: 7/20/2014 - Published: 10/16/2008 - Rodney M., John S. - Complete
A Balancing Act by R. Clowe reviews
Atlantis has been idle for months. No attacks. No injuries. No problems. Until one day, Elizabeth has that gnawing feeling...And circumstances become dire for John Sheppard.
Stargate: Atlantis - Rated: T - English - Chapters: 6 - Words: 33,639 - Reviews: 39 - Favs: 16 - Follows: 35 - Updated: 6/21/2010 - Published: 1/1/2008 - Elizabeth W., John S. - Complete
Converted by domina tempore reviews
An AU version of "Conversion", where the retrovirus is not enough... J/T.
Stargate: Atlantis - Rated: K+ - English - Suspense/Hurt/Comfort - Chapters: 10 - Words: 12,616 - Reviews: 41 - Favs: 18 - Follows: 12 - Updated: 6/15/2010 - Published: 6/3/2009 - Teyla E., John S. - Complete
Darkness Comes by Emagen Laile reviews
John and Merry return to Atlantis to find that something dark is destroying worlds. CURRENTLY BEING REWRITTEN...
Stargate: Atlantis - Rated: T - English - Drama/Romance - Chapters: 11 - Words: 22,414 - Reviews: 7 - Favs: 3 - Follows: 12 - Updated: 3/19/2010 - Published: 12/3/2008 - John S.
Promises by sazz27 reviews
John and Ronon discover that there are worse enemies than the Wraith, and John find his loyalties tested beyond anything he'd imagined.
Stargate: Atlantis - Rated: T - English - Drama/Adventure - Chapters: 1 - Words: 2,813 - Reviews: 7 - Favs: 4 - Follows: 15 - Published: 10/17/2009 - John S., Ronon D.
A Time to Heal by PyroDragon2006 reviews
John thought it was over, but when a new presidential advisor and an old enemy both show up on Atlantis, the wounds run deep. Set after Common Ground, so SPOILERS! Now COMPLETE!
Stargate: Atlantis - Rated: T - English - Drama/Adventure - Chapters: 18 - Words: 53,959 - Reviews: 378 - Favs: 142 - Follows: 127 - Updated: 8/30/2009 - Published: 12/14/2006 - John S., Rodney M. - Complete
Evander's Heir II: Dark Mind by ShepsReyna reviews
The continuation of Sheppard story and why his gene is strongest. He develops his abilities further and struggles to contain them. Shepcentric with shep whump, O'Neill makes a return because I love him too. Some profanity/violence.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 18 - Words: 95,374 - Reviews: 223 - Favs: 113 - Follows: 76 - Updated: 6/14/2009 - Published: 9/14/2008 - John S. - Complete
When All Else Fails by AtlantisJoeFan reviews
The continuing story of John Sheppard and Cat. John should have known better that to sit back and enjoy the moment. Life just didn't play out like that.
Stargate: Atlantis - Rated: T - English - Angst/Adventure - Chapters: 10 - Words: 39,509 - Reviews: 82 - Favs: 6 - Follows: 3 - Updated: 5/15/2009 - Published: 3/17/2009 - John S. - Complete
Crossing the Waters by casus17 reviews
Sequel to Cross Jurisdiction. Team NCIS heads to Atlantis and ends up stuck in the middle of a very Atlantean style crisis...Teammate will battle teammate while around them Atlantis itself falls victim to a nasty virus
Crossover - NCIS & Stargate: Atlantis - Rated: T - English - Adventure/Drama - Chapters: 26 - Words: 76,196 - Reviews: 253 - Favs: 127 - Follows: 68 - Updated: 4/26/2009 - Published: 3/22/2009 - Complete
The Visit by amsilcox reviews
XMenAtlantis crossover with John's father along for the ride. Chapter 15 Operation Backlash is up.
Crossover - X-Men: The Movie & Stargate: Atlantis - Rated: T - English - Chapters: 15 - Words: 55,166 - Reviews: 96 - Favs: 89 - Follows: 149 - Updated: 4/2/2009 - Published: 11/27/2006 - Logan/Wolverine, John S.
SGA Ficlet Challenges by MacGateFan reviews
This is a collection of Atlantis ficlets I wrote for the LJ comm, ShepsAtlantis. We're on season 5.
Stargate: Atlantis - Rated: K+ - English - Chapters: 84 - Words: 56,844 - Reviews: 97 - Favs: 5 - Follows: 13 - Updated: 12/30/2008 - Published: 12/21/2006
The Grass is Always Greener on the Other Side by Merlin71 reviews
Shep whump post Trio events. Sam returns to the SGC for a few weeks, leaving Shep in charge of Atlantis. Things don’t go as planned.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 15 - Words: 46,077 - Reviews: 181 - Favs: 30 - Follows: 76 - Updated: 10/28/2008 - Published: 2/18/2008
Trust by obsessed1 reviews
John and his brother are kidnapped by the Trust and have to escape.
Stargate: Atlantis - Rated: K+ - English - Angst/Hurt/Comfort - Chapters: 8 - Words: 26,360 - Reviews: 131 - Favs: 96 - Follows: 38 - Updated: 9/15/2008 - Published: 9/8/2008 - John S. - Complete
Life Altering by kwillads reviews
4th in series dealing with Sheppard's accident. Following: Three for the Price of Two, Conquering Adversities and Unexpected Surprises. Rated 'T' for some minor bad language.
Stargate: Atlantis - Rated: T - English - Drama/Hurt/Comfort - Chapters: 14 - Words: 132,742 - Reviews: 53 - Favs: 15 - Follows: 8 - Updated: 9/14/2008 - Published: 9/1/2008 - John S. - Complete
On the Road to Come What May by Eildon Rhymer reviews
It started with a strange vessel crashing down from the sky. Then three strangers appeared in a decaying city, willing to risk everything to rescue an injured, imprisoned friend... Outsider viewpoint team fic, with added Shep whump.
Stargate: Atlantis - Rated: T - English - Drama/Hurt/Comfort - Chapters: 16 - Words: 102,309 - Reviews: 225 - Favs: 69 - Follows: 28 - Updated: 9/2/2008 - Published: 8/18/2008 - John S. - Complete
The Butterfly Effect by sparklyshimmer2010 reviews
Major Sheppard managed to save Colonel Sumner. He didn't know this one action could affect so many things.
Stargate: Atlantis - Rated: K+ - English - Adventure/Romance - Chapters: 6 - Words: 19,422 - Reviews: 40 - Favs: 13 - Follows: 21 - Updated: 8/31/2008 - Published: 6/30/2008 - John S., Elizabeth W.
ImagoThe Tao of John by Kristen999 reviews
Imago: a creature in its final stage of development. John receives a gift that might be used to destroy the Wraith. It might also kill him. Can his team convince him that the cost is too high? Team plus Carson and Elizabeth “Tao of Rodney” AU
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 4 - Words: 51,101 - Reviews: 61 - Favs: 55 - Follows: 16 - Updated: 8/29/2008 - Published: 8/25/2008 - John S. - Complete
Grow Up to Your Ruin by Alipeeps reviews
Shep-whumpy episode tag to episode 5x02 - The Seed. MAJOR SPOILERS FOR THE SEED! Now complete.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Drama - Chapters: 3 - Words: 10,813 - Reviews: 38 - Favs: 46 - Follows: 20 - Updated: 8/17/2008 - Published: 8/15/2008 - John S. - Complete
You Belong To Me by ShaViva reviews
"Am I the only one worried about you?" Rodney asked. Sheppard's deepening connection to Atlantis offers unexpected solutions when a threat from within risks the safety of everyone in the city. Sequel 2 Feelin' Hot Hot Hot. Sheplantis, Shep whump
Stargate: Atlantis - Rated: T - English - Drama/Friendship - Chapters: 20 - Words: 34,231 - Reviews: 235 - Favs: 62 - Follows: 37 - Updated: 8/15/2008 - Published: 7/26/2008 - John S. - Complete
Brought to the Brink by godsdaughter77 reviews
John Sheppard goes on a mission, but gets captured…whump and angst ensue.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 14 - Words: 32,068 - Reviews: 113 - Favs: 62 - Follows: 29 - Updated: 7/19/2008 - Published: 7/1/2008 - John S. - Complete
Exhuming McCarthy by everybetty reviews
This was a bunny raised by Kristen999 and everybetty together. After a tragic accident, Sheppard concentrates on recovering while everyone else deals with the political hornets' nest it stirs up. Set S4. Team fic plus Lorne, Keller, Carter and Zelenka.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 22 - Words: 126,896 - Reviews: 348 - Favs: 100 - Follows: 51 - Updated: 7/17/2008 - Published: 5/29/2008 - John S. - Complete
Ghostly Intervention by Astraldust reviews
A routine mission leaves the team trapped in an old building and surrounded by a group of hostile men. They have no real clue as to why. Some McKay whumpage but Shep gets the brunt of it.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 10 - Words: 20,954 - Reviews: 93 - Favs: 43 - Follows: 37 - Updated: 7/3/2008 - Published: 6/17/2008 - John S., Rodney M. - Complete
Tribulations by MrsB108 reviews
Spoilers: A collection of dramatic snippets written from possible scenarios spoiled for Season Four & Season Five of Stargate Atlantis, heavily focusing on John and Teyla.
Stargate: Atlantis - Rated: T - English - Romance/Angst - Chapters: 35 - Words: 25,774 - Reviews: 129 - Favs: 12 - Follows: 13 - Updated: 7/2/2008 - Published: 8/8/2007 - John S., Teyla E.
Zorro's Legacy by ShepsReyna reviews
Sheppard and team go on a vacation, but it turns out to be a struggle just to survive. Set in early Season Four so spoilers up through at least the first half. Shepcentric with lots of Shep whump. Some violence and language but mostly like regular T.V
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 12 - Words: 26,057 - Reviews: 158 - Favs: 87 - Follows: 34 - Updated: 5/20/2008 - Published: 3/24/2008 - John S. - Complete
The Connection by Daring Duo reviews
A tag to The Real World by Merlin71, Kodiak Bear Country, and Titan5.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 18 - Words: 48,192 - Reviews: 234 - Favs: 19 - Follows: 28 - Updated: 4/28/2008 - Published: 4/8/2008 - Complete
Freeze by Wormhole reviews
With the threat of the 'Vampire type race' over and John back to normal, the Atlantis team must now find away to save Elizabeth from the Wraith before it’s too late. Complete
Stargate: Atlantis - Rated: T - English - Adventure/Sci-Fi - Chapters: 48 - Words: 35,134 - Reviews: 109 - Favs: 15 - Follows: 25 - Updated: 4/21/2008 - Published: 5/23/2007 - John S., Elizabeth W. - Complete
Brute Science by CoolBreeze1 reviews
John finds himself on the wrong side of science, and learns first hand what it means when certain scientific assumptions turn out to be wrong. This is pretty creepy, with some heavy Shep whump.
Stargate: Atlantis - Rated: T - English - Horror/Hurt/Comfort - Chapters: 9 - Words: 33,536 - Reviews: 116 - Favs: 71 - Follows: 37 - Updated: 4/11/2008 - Published: 4/5/2008 - John S., Ronon D. - Complete
In the Arms of Angels by cause.A.scene reviews
Tag to Miller's Crossing, then some. - When Sheppard travels down to earth for a few days and finds Jeannie waiting for him, they end up in a sticky situation. No pairings, Spoilers for Miller's Crossing. More details inside. COMPLETE
Stargate: Atlantis - Rated: K - English - Drama/Hurt/Comfort - Chapters: 6 - Words: 24,584 - Reviews: 131 - Favs: 50 - Follows: 47 - Updated: 3/27/2008 - Published: 2/1/2008 - John S. - Complete
Practise to Deceive by Eildon Rhymer reviews
Something is very wrong on Atlantis, and Sheppard is at the heart of it, walking a very dangerous path.
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 17 - Words: 80,334 - Reviews: 364 - Favs: 60 - Follows: 41 - Updated: 3/4/2008 - Published: 2/18/2008 - John S. - Complete
Vengeance Is Mine by Cainwen the Warrior reviews
On the Drilling PlatformSubmersion, Mairghread finds the Queen is her family's murderer, and the suggestion that not all of her siblings died at her hand. But will her family be avenged, and is the last of her siblings past hope of healing? Mature themes
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 25 - Words: 48,057 - Reviews: 131 - Favs: 16 - Follows: 14 - Updated: 3/4/2008 - Published: 7/22/2007 - Ronon D., Teyla E. - Complete
But Not Farewell by AnCa reviews
On a routine mission something goes wrong with the Jumper, Sheppard whumpage and Teyla/Sheppard Friendship follows. Rodney and Ronon get a look-in for good behaviour. COMPLETE.
Stargate: Atlantis - Rated: K+ - English - Chapters: 14 - Words: 20,896 - Reviews: 251 - Favs: 51 - Follows: 80 - Updated: 3/1/2008 - Published: 2/20/2007 - John S., Teyla E. - Complete
Castles in the Sky by Stealth Dragon reviews
Sheppard is captured and to be a slave to the wraith. It becomes more than a matter of survival, but also a matter of keeping his sanity.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 31 - Words: 138,421 - Reviews: 862 - Favs: 169 - Follows: 77 - Updated: 2/8/2008 - Published: 9/27/2007 - John S. - Complete
Cerulean Waters by sglatte reviews
The Atlantis team tries to establish trade with a peaceful, but more primative ocean reliant civilization only to find out an unscrupulous Genii is about to destroy their world as they know it. Can Sheppard and the team save them? Team Mission/ SheppardOC
Stargate: Atlantis - Rated: T - English - Drama/Romance - Chapters: 9 - Words: 16,075 - Reviews: 25 - Favs: 8 - Follows: 7 - Updated: 1/26/2008 - Published: 1/11/2008 - John S.
Conduit by Alipeeps reviews
Written for the Sheppard HC Secret Santa challenge. A problem with the control Chair leads to Sheppard whump.. and a threat to the entire expedition. COMPLETE.
Stargate: Atlantis - Rated: K - English - Drama/Hurt/Comfort - Chapters: 2 - Words: 10,719 - Reviews: 25 - Favs: 44 - Follows: 19 - Updated: 1/16/2008 - Published: 1/15/2008 - John S. - Complete
When Reality Fades by Daring Duo reviews
This is what happens when the dreams are over and reality wants attention. A tag to Doppelganger.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 10 - Words: 18,766 - Reviews: 142 - Favs: 36 - Follows: 27 - Updated: 1/7/2008 - Published: 12/29/2007 - Complete
Long Time Gone by Lorr reviews
Sheppard's team finds a energy reading on a remote planet and goes to investigate. They lose a team member, but find someone long thought dead. Can they get the lost team member back in the limited time they have?
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 11 - Words: 33,755 - Reviews: 18 - Favs: 17 - Follows: 1 - Published: 1/1/2008 - John S., Rodney M. - Complete
Evander's Heir by ShepsReyna reviews
Sheppard learns it is more about him than he could ever imagine. His gene is strongest for a reason, and he learns why. Shepcentric but team invovled, even O'Neill. Shep whump sprinkled through this adventure. Not a fairy tale! AU if that fits better
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 17 - Words: 81,527 - Reviews: 168 - Favs: 177 - Follows: 77 - Updated: 12/30/2007 - Published: 10/9/2007 - John S. - Complete
All in a Day's Work by AtlantisGate reviews
COMPLETED. Something goes wrong when Elizabeth accompanies the team on an offworld mission. SheppardWeir.
Stargate: Atlantis - Rated: T - English - Adventure/Drama - Chapters: 28 - Words: 50,778 - Reviews: 233 - Favs: 38 - Follows: 55 - Updated: 12/26/2007 - Published: 6/18/2006 - John S., Elizabeth W. - Complete
Of Cat Ears and Fangs by Alternate Ego reviews
In which John receives an interesting change to his physique... now continued because you asked for it.
Stargate: Atlantis - Rated: K+ - English - Humor - Chapters: 6 - Words: 16,925 - Reviews: 122 - Favs: 36 - Follows: 43 - Updated: 12/24/2007 - Published: 11/22/2007 - John S., Elizabeth W.
Just Married by Andie O'Neill reviews
It was supposed to be just your average alien celebration… only by morning John Sheppard will be waking up a married man to none other than Doctor Elizabeth Weir.
Stargate: Atlantis - Rated: T - English - Romance/Humor - Chapters: 14 - Words: 33,951 - Reviews: 239 - Favs: 87 - Follows: 101 - Updated: 12/24/2007 - Published: 8/3/2006 - John S., Elizabeth W. - Complete
A Strange Fate by Raven Mysti Carter reviews
The Team meet the one love of John's life and it's someone they never expected. JohnOther....CO Bionic Woman
Stargate: Atlantis - Rated: K+ - English - Romance/Humor - Chapters: 7 - Words: 6,193 - Reviews: 11 - Favs: 1 - Follows: 5 - Updated: 12/16/2007 - Published: 7/24/2007 - John S.
Parallels by Mistress Elysia reviews
Things are never easy on Atlantis, but when a strangely familiar woman suddenly appears from nowhere during the routine investigation of some new Ancient technology, the whole team know that they're in for some trouble, sooner or later... R&R most welcome
Stargate: Atlantis - Rated: T - English - Adventure/Friendship - Chapters: 3 - Words: 10,529 - Reviews: 17 - Favs: 10 - Follows: 15 - Updated: 12/9/2007 - Published: 12/2/2007
For the Children by Deana reviews
Carson, John, and Rodney go back to planet M7G677 when the inhabitants need a doctor. Of course though, our three heroes end up desperately needing saving...but are trapped on the planet when the Gate malfunctions. Whump! No slash
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 15 - Words: 29,498 - Reviews: 194 - Favs: 46 - Follows: 42 - Updated: 12/3/2007 - Published: 2/24/2007 - Carson B., John S. - Complete
The Ties That Bind by Kristen999 reviews
Ronon asks Sheppard to join him on a dangerous search unaware that some answers are gained in the journey. DramaActionHC. Spoilers for Reunion
Stargate: Atlantis - Rated: T - English - Drama/Hurt/Comfort - Chapters: 6 - Words: 21,421 - Reviews: 131 - Favs: 74 - Follows: 24 - Updated: 12/1/2007 - Published: 11/24/2007 - Ronon D., John S. - Complete
Going Home by Titan5 reviews
John is sent back to Earth to recover from his latest set of injuries and decides to visit his father. He is very surprised at the homecoming he receives.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 20 - Words: 95,609 - Reviews: 804 - Favs: 271 - Follows: 138 - Updated: 11/24/2007 - Published: 10/8/2007 - Complete
The Night is Full of Mares by Miss Lestrade reviews
Revised again! This story will now be based around three characters and their worst childhood memories and how their pasts come back to haunt them. Just read Please.
Stargate: Atlantis - Rated: K+ - English - Supernatural/Horror - Chapters: 15 - Words: 11,298 - Reviews: 51 - Favs: 9 - Follows: 6 - Updated: 11/23/2007 - Published: 6/22/2007 - Rodney M. - Complete
The Carter Report by dreamer one reviews
A tag to the SGA episode, The Seer. Woolsey personally delivers his report to Homeworld Security and Jack O'Neill.
Stargate: Atlantis - Rated: K - English - Romance - Chapters: 2 - Words: 2,354 - Reviews: 33 - Favs: 16 - Follows: 4 - Updated: 11/18/2007 - Published: 11/17/2007 - Complete
Significant Figures by T'Pring reviews
Wounded, alone, and pursued by ruthless bandits, John must depend on his team to figure out the clues he's left for them.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 4 - Words: 18,068 - Reviews: 105 - Favs: 64 - Follows: 32 - Updated: 11/17/2007 - Published: 11/12/2007 - John S. - Complete
Second Chances by Andie O'Neill reviews
When Elizabeth Weir finally admits her feelings toward John Sheppard, he shoots her down, but after a surprise attack she dies in his arm, he begins to regret hurting her, but of course its to late... or is it?
Stargate: Atlantis - Rated: T - English - Romance/Angst - Chapters: 11 - Words: 23,574 - Reviews: 147 - Favs: 29 - Follows: 72 - Updated: 11/13/2007 - Published: 6/16/2006 - John S., Elizabeth W.
Torment by chokolaj reviews
The title says it all, folks. Shep Whump!
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 20 - Words: 22,128 - Reviews: 126 - Favs: 23 - Follows: 27 - Updated: 11/4/2007 - Published: 7/23/2007 - Complete
The Path Not Taken by Wormhole reviews
An old enemy seeks revenge, whilst a new race seeks to conquer.
Stargate: Atlantis - Rated: K+ - English - Adventure/Tragedy - Chapters: 11 - Words: 13,011 - Reviews: 14 - Favs: 7 - Follows: 3 - Updated: 10/25/2007 - Published: 4/12/2007 - Elizabeth W., Rodney M.
Alone by SGAFan reviews
Not your ordinary, every day, trip through the Stargate... at least not for John Sheppard. COMPLETE! Warning: There be Whump here!
Stargate: Atlantis - Rated: K+ - English - Chapters: 8 - Words: 27,580 - Reviews: 185 - Favs: 62 - Follows: 50 - Updated: 10/21/2007 - Published: 8/9/2007 - John S. - Complete
Signs, Signs, Everywhere a Sign by everybetty reviews
Written for the shepsatlantis LJ ficathon. S2ish. Contains the daily recommended dose of ShepWhump. It was just a trading mission...NOW COMPLETE
Stargate: Atlantis - Rated: T - English - Humor/Hurt/Comfort - Chapters: 3 - Words: 16,262 - Reviews: 37 - Favs: 32 - Follows: 23 - Updated: 10/17/2007 - Published: 9/23/2007 - John S. - Complete
The Artifact by Ognonamis reviews
After the team comes in contact with a small artifact, odd things begin to happen to Colonel Sheppard. Chapter 17 is up FINALLY! Please, read and review.
Stargate: Atlantis - Rated: T - English - Drama/Romance - Chapters: 17 - Words: 34,885 - Reviews: 121 - Favs: 17 - Follows: 35 - Updated: 10/13/2007 - Published: 6/5/2006 - John S., Teyla E.
A Rock And A Hard Place by T'Pring reviews
John Sheppard is who he is. And that usually gets him in trouble. On trial for his actions during a mission gone horribly wrong, his team is forced to testify against him, his superiors have given him up for lost...and where the heck is McKay!
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 13 - Words: 29,782 - Reviews: 108 - Favs: 26 - Follows: 21 - Updated: 10/8/2007 - Published: 9/24/2007 - John S. - Complete
The Way Home by Frisco reviews
Security protocols on an Ancient outpost separate the team, and an accident leaves Sheppard and McKay injured. Can they find each other and the way home? Spoilers through The Return with one tiny one for The Game.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 8 - Words: 35,253 - Reviews: 180 - Favs: 61 - Follows: 50 - Updated: 10/8/2007 - Published: 9/13/2007 - John S., Rodney M. - Complete
Standing on the Shoulders of Giants by Tipper reviews
City in peril, check. Sheppard and team on a suicidal mission, check. McKay acting like an ass and doing his own thing, check. We've seen it all before—but Col. Sam Carter hasn't.
Stargate: Atlantis - Rated: T - English - Drama/Suspense - Chapters: 2 - Words: 7,059 - Reviews: 54 - Favs: 64 - Follows: 3 - Published: 9/30/2007 - Rodney M. - Complete
That Sinking Feeling by kashkow reviews
Things are not going well for John Sheppard, and they are about to get infinitely worse. Minor whumpage and slight angst. What more could anyone ask for? Rated T for the occasional bad word, some of them in Czech.
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 1 - Words: 52,659 - Reviews: 37 - Favs: 104 - Follows: 7 - Published: 9/21/2007 - John S., Rodney M. - Complete
Pulling Rank by T'Pring reviews
When Ronon and an injured Sheppard are stuck on a deserted planet surrounded by Michael's Bug Monsters, Ronon must decide whether to follow Sheppard's lead, or follow his own instincts. In the end, it comes down to trust...
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 3 - Words: 12,005 - Reviews: 105 - Favs: 73 - Follows: 28 - Updated: 9/13/2007 - Published: 9/9/2007 - Ronon D., John S. - Complete
Wee Little Bugger by Warsh reviews
“We fought the majority of them off… but Carson has a… uh, well, a 'little' problem.” Warning: plausible cuteness overload. [Au, CarsonJohn friendship NOT SLASH] This story has not been beta read. All mistakes are my own.
Stargate: Atlantis - Rated: K+ - English - Chapters: 3 - Words: 5,975 - Reviews: 50 - Favs: 17 - Follows: 52 - Updated: 9/9/2007 - Published: 8/31/2007 - Carson B., John S.
Grounded by Lucilla2 reviews
The sequel to and continuation of my earlier fic ‘Consanguinity’. The Team helps Sheppard get back on his feet after he’s been injured, with a dose of Shep whump when his recovery suffers a setback. Gen Team friendship fic, plus Beckett. Now COMPLETE.
Stargate: Atlantis - Rated: T - English - Friendship/Hurt/Comfort - Chapters: 8 - Words: 26,679 - Reviews: 54 - Favs: 25 - Follows: 32 - Updated: 9/8/2007 - Published: 8/9/2007 - John S. - Complete
Fade to Black by Daring Duo reviews
The sequel, or continuation, of The White Room in which John and Rodney get into all kinds of trouble working as slaves and battling Kolya.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 18 - Words: 64,761 - Reviews: 227 - Favs: 53 - Follows: 33 - Updated: 9/7/2007 - Published: 8/2/2007 - Complete
Crimes Against Humanity by Frisco reviews
Sheppard and McKay are arrested and imprisoned offworld for crimes they didn't commit. After John is injured, Rodney struggles to protect him and find a way out. WARNING: Spoilers through the end of S3.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 5 - Words: 9,386 - Reviews: 49 - Favs: 27 - Follows: 24 - Updated: 9/4/2007 - Published: 8/27/2007 - Rodney M., John S. - Complete
Under The Surface by Pilgrim Soul reviews
A routine mission goes horribly wrong when the team find themselves trapped and seriously injured. Team fic. Whump all round. WIP
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 6 - Words: 23,683 - Reviews: 85 - Favs: 39 - Follows: 89 - Updated: 9/3/2007 - Published: 11/28/2006
Misappropriation by MrsB108 reviews
When a manual of rules and regulations gets sent out in Atlantis, it sparks a rebellion that could have disastrous consequences.
Stargate: Atlantis - Rated: T - English - Romance/Angst - Chapters: 23 - Words: 13,542 - Reviews: 124 - Favs: 15 - Follows: 17 - Updated: 9/1/2007 - Published: 8/18/2007 - John S., Teyla E. - Complete
The Exchange by kazavid reviews
After being rescued from certain death, Sheppard must now escape, or persuade, his 'rescuers', not to hand him over, to face retribution, from someone who wants to see him dead.
Stargate: Atlantis - Rated: M - English - Angst/Romance - Chapters: 10 - Words: 37,675 - Reviews: 40 - Favs: 11 - Follows: 9 - Updated: 8/30/2007 - Published: 6/27/2007 - John S. - Complete
Inebriation by obsessed1 reviews
Summary: It was supposed to be simple so how did their mission end with a very drunk, whumped Colonel. The link for this seems to be a bit touchy so if it doesn't work you can find this over at my livejournal in my authors profile.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Humor - Chapters: 9 - Words: 17,726 - Reviews: 103 - Favs: 42 - Follows: 23 - Updated: 8/28/2007 - Published: 8/6/2007 - John S., Rodney M.
Dreaming of Electric Sheep by theEOWs reviews
Are video games hazardous to one's health? The team is about to find out. Another whirlwind adventure written by Drufan and Stealth Dragon
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 13 - Words: 34,601 - Reviews: 114 - Favs: 17 - Follows: 20 - Updated: 8/13/2007 - Published: 7/28/2007 - Complete
Retribution by Frisco reviews
Sheppard is captured offworld and hunted in retribution for prior acts. Spoilers through Sunday. Rating is for violence.
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 1 - Words: 5,359 - Reviews: 13 - Favs: 18 - Published: 8/6/2007 - John S. - Complete
Nightmare Revisited by Merlin71 reviews
A tag to Vengeance in which John remembers why he really hates bugs. Spoilers for Vengeance as well as Sunday.
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 1 - Words: 5,776 - Reviews: 8 - Favs: 8 - Published: 8/6/2007 - Complete
The Price of Freedom by Astraldust reviews
Captured offworld, John and Rodney are sold into slavery. A Shep centred story with a whump or two. Now complete!
Stargate: Atlantis - Rated: T - English - Friendship - Chapters: 15 - Words: 44,332 - Reviews: 157 - Favs: 35 - Follows: 27 - Updated: 8/6/2007 - Published: 7/10/2007 - John S., Rodney M. - Complete
Damaged by obsessed1 reviews
When Sheppard and his team go offworld, things don’t go to plan and Sheppard gets beaten, tied to tree and nearly killed by his teammates.
Stargate: Atlantis - Rated: K+ - English - Angst/Hurt/Comfort - Chapters: 14 - Words: 35,598 - Reviews: 258 - Favs: 75 - Follows: 63 - Updated: 8/6/2007 - Published: 6/19/2007 - John S.
Shattered by SGAFan reviews
A close shave with death leaves John Sheppard searching for answers. Warning: Shep Whump!
Stargate: Atlantis - Rated: K+ - English - Drama - Chapters: 11 - Words: 38,140 - Reviews: 210 - Favs: 55 - Follows: 62 - Updated: 8/5/2007 - Published: 2/22/2007 - John S. - Complete
Bound To Happen by Lady Valmar reviews
Mysterious blipping energy readings lead to Sheppard being strapped to an altar, his team being held prisoner by the local natives, Rodney being experimented on and the introduction to a devious enemy to contend with. Gen only.
Stargate: Atlantis - Rated: T - English - Chapters: 24 - Words: 62,216 - Reviews: 47 - Favs: 7 - Follows: 29 - Updated: 8/3/2007 - Published: 1/21/2006 - Complete
Consanguinity by Lucilla2 reviews
When the team seeks shelter from violent weather during a mission, Sheppard comes out the loser during an encounter with the local wildlife. Shep whump. COMPLETE. But there is now a SEQUEL to this fic, called Grounded.
Stargate: Atlantis - Rated: T - English - Friendship/Hurt/Comfort - Chapters: 4 - Words: 15,997 - Reviews: 24 - Favs: 26 - Follows: 12 - Updated: 7/31/2007 - Published: 7/24/2007 - John S., Rodney M. - Complete
Honor Bound by Kristen999 reviews
Sometimes all that matters are the codes and values you uphold. A deadly vendetta will test loyalties, limits and friendships, with more at stake than anyone realizes. Contains Shep Whump. John,Ronon, Rodney Friendship
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Drama - Chapters: 18 - Words: 82,638 - Reviews: 320 - Favs: 113 - Follows: 62 - Updated: 7/27/2007 - Published: 6/9/2007 - John S., Ronon D. - Complete
Not the Villain You Know by Kodiak Bear Country reviews
Written for the sga flashfic villains challenge. John creates memories with his team because soon everything will change. Beginning of the Tok'ra series.
Stargate: Atlantis - Rated: T - English - Chapters: 2 - Words: 3,874 - Reviews: 22 - Favs: 11 - Follows: 8 - Published: 7/27/2007 - John S. - Complete
Children of the What! by sempaiko reviews
Sheppard, McKay, Beckett and Ronon are reverted back to being children by a rogue Wraith. With their memory intact, but fading, they must race to find a way to return to adults. Little do they know the Wraith is coming to them to retrieve what is hers.
Stargate: Atlantis - Rated: T - English - Adventure/Humor - Chapters: 1 - Words: 6,183 - Reviews: 13 - Favs: 8 - Follows: 22 - Published: 7/25/2007
The White Room by Daring Duo reviews
Sheppard seems to have lost his mind and no one can figure out why.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 24 - Words: 77,076 - Reviews: 313 - Favs: 66 - Follows: 41 - Updated: 7/24/2007 - Published: 6/4/2007 - Complete
Descent by T'Pring reviews
Sheppard finds himself in the hands of terrorists who plague a new ally. Alone, and certain that Atlantis has no idea where he is, John must find a way to escape before he loses all sense of what is real...and what is not.
Stargate: Atlantis - Rated: T - English - Suspense/Hurt/Comfort - Chapters: 13 - Words: 25,637 - Reviews: 85 - Favs: 35 - Follows: 22 - Updated: 7/24/2007 - Published: 7/16/2007 - John S., Elizabeth W. - Complete
Among the Ruins by Merlin71 reviews
The team falls ill and Sheppard and Beckett will do whatever it takes to save them. Whumpage abounds. Carson displaces Rodney on the team this time. Due to circumstances beyond my control. Heee.
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 14 - Words: 35,060 - Reviews: 193 - Favs: 33 - Follows: 48 - Updated: 7/22/2007 - Published: 11/12/2005 - John S., Carson B. - Complete
Overload by Lorr reviews
Sheppard halted them at the foot of the stairs. Elizabeth was between them, but he would only need to move his hand a couple of inches to aim the gun at either of the men.
Stargate: Atlantis - Rated: K+ - English - Drama/Hurt/Comfort - Chapters: 6 - Words: 19,784 - Reviews: 26 - Favs: 23 - Follows: 1 - Published: 7/22/2007 - John S., Carson B. - Complete
Orphan No More by Cainwen the Warrior reviews
John and Co. rescue CulloughThe Captive Wraith's infant daughter from stasis, where she has been for 18000 years. But can they prove she's an asset and not a liability before the I.O.A steps in? Please R&R Sequel to 'You Do Not Know&Shadow of Death
Stargate: Atlantis - Rated: T - English - Humor/Drama - Chapters: 34 - Words: 41,439 - Reviews: 167 - Favs: 30 - Follows: 16 - Updated: 7/22/2007 - Published: 5/7/2007 - Ronon D., Carson B. - Complete
Sweet Regret by Andie O'Neill reviews
In a moment of weakness John and Elizabeth find themselves in bed together, but when John and Teyla must rely on each other for more than six years before escaping slavery, Weir must deal with their romantic relationship while trying to keep a secret.
Stargate: Atlantis - Rated: T - English - Romance/Angst - Chapters: 18 - Words: 47,259 - Reviews: 163 - Favs: 28 - Follows: 49 - Updated: 7/15/2007 - Published: 9/24/2006 - John S., Elizabeth W. - Complete
The crimespree by Flowerhead101 reviews
When Sheppard activates an Ancient device nothing seems wrong. But when people start getting hurt, the Atlantis team start to investigate. Will they realize what's wrong with Sheppard?
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 9 - Words: 17,182 - Reviews: 40 - Favs: 15 - Follows: 19 - Updated: 7/14/2007 - Published: 3/29/2007 - John S. - Complete
You Mean My Day Just Got Worse? by Lady Lemons reviews
Team Sheppard goes to a planet to seek out some ruins but it's a trap set by a dead man. Then the wraith show up! Much fun for all. This three parter is now DONE mwahahaha! Completely DoNe!
Stargate: Atlantis - Rated: K+ - English - Adventure - Chapters: 3 - Words: 10,899 - Reviews: 5 - Favs: 8 - Follows: 1 - Updated: 7/12/2007 - Published: 7/10/2007 - John S., Rodney M. - Complete
Sherwood by Oparu reviews
It's an AU where John Sheppard is Robin Hood and Elizabeth is not quite a damsel in distress. Slight SG1 crossover.
Stargate: Atlantis - Rated: T - English - Adventure/Romance - Chapters: 1 - Words: 9,613 - Reviews: 10 - Favs: 16 - Published: 7/12/2007 - Elizabeth W., John S. - Complete
Little Man Sheppard by Stealth Dragon reviews
An Accident leads to a very interesting situation for John, and a learning curve for Rodney. John and Rodney friendship.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 1 - Words: 15,309 - Reviews: 90 - Favs: 120 - Follows: 8 - Published: 7/7/2007 - John S., Rodney M. - Complete
After Effects by Wyndhamfan reviews
A Common Ground tag. Sheppard seems recovered after being fed on by the Wraith, but looks are deceiving. Also, Sheppard gets in trouble in more ways than one.
Stargate: Atlantis - Rated: T - English - Adventure/Sci-Fi - Chapters: 6 - Words: 12,975 - Reviews: 97 - Favs: 36 - Follows: 99 - Updated: 7/6/2007 - Published: 8/27/2006 - John S.
Game Over by Merlin71 reviews
What surprises does Atlantis have in store for Sheppard and Ronon? Read to find out.
Stargate: Atlantis - Rated: T - English - Chapters: 5 - Words: 15,149 - Reviews: 98 - Favs: 33 - Follows: 43 - Updated: 7/4/2007 - Published: 3/21/2007 - John S., Ronon D. - Complete
The Hunted by ValleyA reviews
Sheppard's team is attacked off planet. Part of the team is stranded on the other side of the gate, but both the stranded team and Atlantis have problems to resolve before a rescue can be started. LOTS of Shep whumping...lots of whumping in general! LOL
Stargate: Atlantis - Rated: T - English - Adventure/Suspense - Chapters: 31 - Words: 113,726 - Reviews: 161 - Favs: 47 - Follows: 53 - Updated: 7/3/2007 - Published: 10/20/2006 - John S., Rodney M. - Complete
No Chump Change by tielan reviews
Sam finds John Sheppard sitting out on the mountainside, and seeks to draw out the poison from a new wound. [friendship, spoilers for Return I]
Stargate: Atlantis - Rated: T - English - Chapters: 1 - Words: 1,055 - Reviews: 7 - Favs: 4 - Published: 7/2/2007 - John S. - Complete
Savage by Laatija reviews
Just a routine trip to find a ZPM. But since when has anything gone as planned? Shep Whump! well, at least it started out as just Sheppard but now its morphed into whump all around! Yay!
Stargate: Atlantis - Rated: T - English - Adventure/Fantasy - Chapters: 16 - Words: 23,507 - Reviews: 104 - Favs: 15 - Follows: 35 - Updated: 6/19/2007 - Published: 4/4/2007 - John S. - Complete
As I Lay Dying by T'Pring reviews
Is Sheppard doomed to die, over and over again for all time? Or can he solve the puzzle of the cursed planet before another bullet takes him...
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 9 - Words: 19,565 - Reviews: 143 - Favs: 71 - Follows: 29 - Updated: 6/11/2007 - Published: 5/29/2007 - John S. - Complete
Leave No Man Behind by CoolBreeze1 reviews
John Sheppard returns to Atlantis alone and struggles with the fact that he left his team behind. Mostly Shep whumping, some team whumping. Friendship only, no slash
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 8 - Words: 26,496 - Reviews: 47 - Favs: 32 - Follows: 20 - Updated: 6/8/2007 - Published: 5/31/2007 - John S. - Complete
Endless Night by obsessed1 reviews
Sheppard spends one night alone and in pain. FINISHED
Stargate: Atlantis - Rated: K+ - English - Drama/Angst - Chapters: 3 - Words: 11,859 - Reviews: 69 - Favs: 56 - Follows: 28 - Updated: 6/4/2007 - Published: 5/30/2007 - Rodney M., John S. - Complete
An Ill Wind That Blows by Alipeeps reviews
Challenge fic, Elements prompt. Sheppard and team run into trouble when the weather turns bad. Team fic. Shep whumpage.
Stargate: Atlantis - Rated: T - English - Drama/Hurt/Comfort - Chapters: 8 - Words: 31,781 - Reviews: 212 - Favs: 57 - Follows: 98 - Updated: 6/2/2007 - Published: 10/25/2006 - John S.
Outcomes and Consequences by flowk reviews
AU version of what happened after Allies, with the implications of Sheppard having the ATA gene. Crossover with SG1. An alternate Season 3. Spoilers for anything through first half of Season 3. FINALLY FINISHED!
Stargate: Atlantis - Rated: T - English - Adventure/Romance - Chapters: 32 - Words: 120,956 - Reviews: 260 - Favs: 110 - Follows: 88 - Updated: 5/31/2007 - Published: 7/9/2006 - John S., Elizabeth W. - Complete
The Return Part 2: Favorite Son by Titan5 reviews
An AU version of what happens after the Return, featuring a strong connection between John and Atlantis.
Stargate: Atlantis - Rated: T - English - Chapters: 21 - Words: 84,218 - Reviews: 335 - Favs: 96 - Follows: 62 - Updated: 5/30/2007 - Published: 4/3/2007 - Complete
Dangerous Accusation by Hannah554 reviews
AU, LA Cop John Sheppard is accused of being a serial killer, his partner Teyla desperately tries to clear his name meanwhile FBI Agents Ronon and Elizabeth try to track him down. Sparky Spanky
Stargate: Atlantis - Rated: T - English - Romance/Adventure - Chapters: 27 - Words: 40,009 - Reviews: 183 - Favs: 19 - Follows: 18 - Updated: 5/18/2007 - Published: 3/7/2007 - Complete
Brothers in Arms by Scully2 reviews
Set immediately after Common Ground in Season 3. Sheppard struggles to deal with the aftermath of the events in the episode Common Ground, and decides to take matters into his own hands. Spoilers up to the latter half of S3.
Stargate: Atlantis - Rated: K+ - English - Adventure/Angst - Chapters: 12 - Words: 41,508 - Reviews: 111 - Favs: 33 - Follows: 60 - Updated: 5/13/2007 - Published: 3/22/2007 - John S.
Incubator by Titan5 reviews
John is captured by aliens and experimented on. This is a creepy one.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 2 - Words: 16,853 - Reviews: 64 - Favs: 46 - Follows: 20 - Updated: 5/9/2007 - Published: 5/7/2007 - Complete
New Beginnings by ZebbieCullen reviews
Dr Cassandra Fraiser gets offered a job on Atlantis and begins a new life in the Pegasus Galaxy. Sequel to my 'Baby' Fics.
Stargate: Atlantis - Rated: T - English - Humor - Chapters: 11 - Words: 17,325 - Reviews: 26 - Favs: 5 - Follows: 9 - Updated: 5/6/2007 - Published: 4/20/2007 - Complete
Demons by SGAFan reviews
When a routine mission goes horribly wrong, Major John Sheppard survives, but now must face an enemy none of his training or experience could prepare him for himself. Suddenly, John is forced to question everything he's ever stood for.
Stargate: Atlantis - Rated: K+ - English - Drama/Adventure - Chapters: 8 - Words: 144,010 - Reviews: 55 - Favs: 38 - Follows: 2 - Published: 5/5/2007 - John S., Elizabeth W. - Complete
Snow Yeti by flah7 reviews
A Snow Yeti, a missing team, a rescue. Oh and a Wraith Worshipper too. Team fic with Beckett
Stargate: Atlantis - Rated: K - English - Chapters: 11 - Words: 36,389 - Reviews: 197 - Favs: 23 - Follows: 17 - Updated: 5/5/2007 - Published: 4/21/2007 - Complete
Whatever They May Be by parisindy reviews
Takes place directly after the episode ‘The Return P1’ S03E10 This is an alternative tag to what happened in P1... Shep Whump
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 3 - Words: 7,189 - Reviews: 26 - Favs: 4 - Follows: 20 - Updated: 5/3/2007 - Published: 4/24/2007 - John S.
Under the Mud by Splitbeak reviews
A visit to a village covered in mud leads to a captured Colonel, and an unexpected alliance with an old enemy. Shep whump. Dark fic.
Stargate: Atlantis - Rated: M - English - Angst/Adventure - Chapters: 23 - Words: 71,790 - Reviews: 198 - Favs: 27 - Follows: 79 - Updated: 4/30/2007 - Published: 5/16/2006 - John S., Rodney M.
Desperate Hours by aloola reviews
A bounty hunter caused problems for our team during a routine trade negotiation. Set late season three. Now COMPLETE....
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Angst - Chapters: 16 - Words: 36,073 - Reviews: 176 - Favs: 27 - Follows: 22 - Updated: 4/30/2007 - Published: 4/4/2007 - John S. - Complete
A Room With A View by Cielito reviews
Spoilers for SGA Season 3 episode Sunday. Rodney ponders the last year and remembers John and Teyla's relationship. Character deathsomber. Rodney's POV. Tag continuation with JTjaforever fics.
Stargate: Atlantis - Rated: K - English - Angst/Romance - Chapters: 1 - Words: 5,661 - Reviews: 22 - Favs: 7 - Published: 4/29/2007 - John S., Teyla E. - Complete
Full Moon Rising by Sparks reviews
John Sheppard isn't exactly a normal human, and it's not easy to hide that in the Pegasus galaxy. Set seasons 1 and 2, slash warning.
Stargate: Atlantis - Rated: T - English - Sci-Fi - Chapters: 11 - Words: 19,135 - Reviews: 60 - Favs: 73 - Follows: 37 - Updated: 4/28/2007 - Published: 11/11/2006 - John S., Rodney M. - Complete
Mind Over Matter by Dr. Dredd reviews
John starts to exhibit telekinetic abilities after returning through the time dilation portal. Takes place between Epiphany and Critical Mass, spoilers for Epiphany and Condemned. COMPLETE!
Stargate: Atlantis - Rated: T - English - Chapters: 17 - Words: 38,895 - Reviews: 330 - Favs: 128 - Follows: 104 - Updated: 4/24/2007 - Published: 1/27/2006 - John S., Carson B. - Complete
Getting Past and Moving Foward by SGA-sweetheart reviews
When part of John’s past comes to Atlantis, John has to reevaluate his feelings for someone he used to care a lot about, but is he ready for it?
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 9 - Words: 6,809 - Reviews: 31 - Favs: 7 - Follows: 6 - Updated: 4/24/2007 - Published: 3/18/2007 - John S. - Complete
Whip No More by ErikaHK reviews
The team finds themselves on the hands of dangerous arm dealers. Whumping, team fic, angst, rated T for torture. Spoilers for up to season three Common Ground.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 9 - Words: 16,840 - Reviews: 52 - Favs: 13 - Follows: 23 - Updated: 4/24/2007 - Published: 4/6/2007 - Complete
Never Stop Moving by Tipper reviews
Chases, explosions, head wounds, twisted ankles, damaged ships and a desert serve as the backdrop to a rescue mission that doesn't quite go as planned. In other words, a typical Atlantis mission o' mayhem. Team Fic.
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 23 - Words: 88,596 - Reviews: 511 - Favs: 78 - Follows: 41 - Updated: 4/21/2007 - Published: 3/17/2007 - Teyla E. - Complete
One of Those Days by Autumn leaves reviews
Seriously injured by an alien device, Sheppard is in trouble while the team is hunted by hostile aliens. Warning: Whumps galore! COMPLETED
Stargate: Atlantis - Rated: T - English - Adventure/Drama - Chapters: 16 - Words: 37,455 - Reviews: 260 - Favs: 46 - Follows: 52 - Updated: 4/17/2007 - Published: 2/23/2007 - John S., Rodney M. - Complete
Sticks And Snails by Camerine reviews
You know that rhyme? Sticks And Snails And Puppy Dog Tails? Well, what happens when John, Teyla and Ronan are turned into children offworld and are thrust into Rodney's care? FINISHED: 5.16.06 — EDITED: 4.2.07
Stargate: Atlantis - Rated: T - English - Romance/Humor - Chapters: 12 - Words: 40,173 - Reviews: 117 - Favs: 29 - Follows: 28 - Updated: 4/2/2007 - Published: 5/9/2006 - Teyla E., John S. - Complete
The Former Mrs Sheppard by ancientmaverick reviews
An exploration of John's comments in Sunday about marriage. Just what happened all those years ago? Spoilers up to Tao of Rodney. Now complete!
Stargate: Atlantis - Rated: K+ - English - Chapters: 6 - Words: 10,075 - Reviews: 59 - Favs: 9 - Follows: 24 - Updated: 3/31/2007 - Published: 1/30/2007 - John S. - Complete
The Five Phases by keegan94820 reviews
After a trip to a, supposed, Ancient Outpost Sheppard finds himslef in yet another problem.What would happen if we put telepathic abilities and John together? Read inside for better summary. Parings inside as well.
Stargate: Atlantis - Rated: K+ - English - Adventure/Mystery - Chapters: 11 - Words: 22,337 - Reviews: 72 - Favs: 6 - Follows: 24 - Updated: 3/31/2007 - Published: 10/13/2006 - John S.
Miles from Nowhere by isolated fear reviews
It was supposed to be a normal mission, but aren't they all? Sheppard and his team get into trouble offworld again. Rated T for a little language, nothing too bad.
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 10 - Words: 18,542 - Reviews: 47 - Favs: 7 - Follows: 10 - Updated: 3/21/2007 - Published: 9/29/2006 - Complete
Inside Connection by Titan5 reviews
John has this nagging feeling that something is wrong with Atlantis, but he can't figure out what it is and it's driving him crazy. And it's making everyone else worry about both him and Atlantis.
Stargate: Atlantis - Rated: T - English - Chapters: 3 - Words: 13,791 - Reviews: 114 - Favs: 83 - Follows: 40 - Updated: 3/20/2007 - Published: 3/17/2007 - Complete
The Weight of an Oath by Emrys1 reviews
Sheppard and his team stumble across a society that may have had some connections with the Ancients. Shepwhumping. ShepMcKay friendship. Warning: Some colorful language present in various chapters. IT'S FINISHED! YAHOO!
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 18 - Words: 53,020 - Reviews: 220 - Favs: 43 - Follows: 60 - Updated: 3/18/2007 - Published: 12/1/2005 - Complete
Quest for the Codes by Jenwryn reviews
Elizabeth/John established. Meg/McKay UST. Sequel to "Elizabeth's Email". Studying the device McKay brought back from the Ancient Area 51 they find the answer to all their problems. Or not. Meanwhile, Meaghan is keeping secrets. My MegAU. Edited July 2008
Stargate: Atlantis - Rated: T - English - Romance/Adventure - Chapters: 14 - Words: 19,835 - Reviews: 35 - Favs: 6 - Follows: 9 - Updated: 3/16/2007 - Published: 3/2/2007 - Elizabeth W., Rodney M. - Complete
Anything for anyone, Especially You by Anjirika reviews
-Complete- John once told Teyla that he would do anything for his family, one day they all find out what anything really entails. Takes place in S3 with no bearing on the season. PLZ R&R! *NOMINATED FOR THE 2007 STARGATE FAN AWARDS*
Stargate: Atlantis - Rated: K+ - English - Sci-Fi/Romance - Chapters: 11 - Words: 10,247 - Reviews: 45 - Favs: 10 - Follows: 16 - Updated: 3/12/2007 - Published: 10/23/2006 - Elizabeth W., John S. - Complete
Parasites by Neuropsych reviews
Something is making everyone sick... can Beckett figure it out before things go from bad to much worse?
Stargate: Atlantis - Rated: T - English - Chapters: 42 - Words: 44,178 - Reviews: 68 - Favs: 4 - Follows: 12 - Updated: 3/11/2007 - Published: 9/28/2006
The New Guys by T'Pring reviews
Elizabeth was looking forward to watching Col. Sheppard win over a new batch of Pegasus Galaxy recruits... When the Wraith disrupt a routine training mission, Sheppard must show the new guys what it takes to get everyone home. Shep whump ensues. COMPLETE
Stargate: Atlantis - Rated: T - English - Chapters: 5 - Words: 18,432 - Reviews: 131 - Favs: 198 - Follows: 30 - Updated: 3/11/2007 - Published: 3/9/2007 - John S. - Complete
Pyrotechnics by Stealth Dragon reviews
Vacations usually don't involve attacks by space pirates, emergency crash landings, wild fires, and saving the day when you're already injured.
Stargate: Atlantis - Rated: T - English - Adventure/Suspense - Chapters: 12 - Words: 60,073 - Reviews: 262 - Favs: 79 - Follows: 34 - Updated: 3/10/2007 - Published: 3/1/2007 - John S., Rodney M. - Complete
What He Left Behind by lia-finn reviews
Stranded on a distant world, John can only wait for rescue and wonder how life at home passes without him. SheppardWeir
Stargate: Atlantis - Rated: T - English - Romance/Angst - Chapters: 10 - Words: 11,256 - Reviews: 41 - Favs: 15 - Follows: 13 - Updated: 3/7/2007 - Published: 2/15/2007 - John S., Elizabeth W. - Complete
This is Paradise You Just Don't Realize It Yet by Strawberry Cupcake reviews
John and Teyla are stuck in a ship alone for two years trying to get home. Need I say more? Sheyla with some side pairings: McWeir, RononOC. Rating for later chapters. Warnings for some torture.
Stargate: Atlantis - Rated: T - English - Romance/Drama - Chapters: 11 - Words: 21,605 - Reviews: 99 - Favs: 26 - Follows: 46 - Updated: 3/5/2007 - Published: 12/20/2005 - John S., Teyla E.
To Square the Circle by Twinchy reviews
Setting: Season 3, some time after 'Common Ground', Story: Trading missions can be murder, Shep whump, McShep friendship, team story, Carson, Genii, Kolya, Now Complete!
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 10 - Words: 12,015 - Reviews: 79 - Favs: 15 - Follows: 28 - Updated: 2/22/2007 - Published: 1/29/2007 - John S., Rodney M. - Complete
You Do Not Know by Cainwen the Warrior reviews
The thoughts of the Wraith during Common Ground. No Slash, sex, mild profanity. Please R&R. Rated T for safety. NOW COMPLETE!
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 18 - Words: 21,461 - Reviews: 160 - Favs: 52 - Follows: 30 - Updated: 2/21/2007 - Published: 8/30/2006 - John S. - Complete
Beatae Memoriae by sazz27 reviews
On a desolate alien planet, John Sheppard is lost in more ways than one.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 23 - Words: 87,708 - Reviews: 332 - Favs: 90 - Follows: 50 - Updated: 2/20/2007 - Published: 12/27/2006 - John S., Rodney M. - Complete
The Fawning by Child of Loki reviews
John returns to Atlantis after an incident offworld exposes him to an alien disease. And the only thing more disturbing and bizarre than its effects is its origin. For Clarity: This is a JohnElizabeth fic.
Stargate: Atlantis - Rated: T - English - Romance/Angst - Chapters: 10 - Words: 23,565 - Reviews: 110 - Favs: 30 - Follows: 37 - Updated: 2/19/2007 - Published: 1/13/2007 - John S., Elizabeth W. - Complete
Two Way Street by Stealth Dragon reviews
“Survival, Sheppard. It's all about survival...” Team fic, team whump.
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 3 - Words: 24,397 - Reviews: 139 - Favs: 93 - Follows: 27 - Updated: 2/17/2007 - Published: 2/15/2007 - John S., Rodney M. - Complete
Lonely Silence by TangledPencils reviews
The team run into trouble on a simple trading mission, and Sheppard has a problem. ShepWhump. First attempt at FF, hope I've got the rating right.
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 14 - Words: 31,087 - Reviews: 206 - Favs: 19 - Follows: 62 - Updated: 2/15/2007 - Published: 9/4/2006 - John S.
Stranded by Deana reviews
John and Carson accidentally crash a Jumper on the mainland, with no way to contact Atlantis for help. Of course, the desperate situation quickly turns life threatening for them both. NO SLASH.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 9 - Words: 16,533 - Reviews: 135 - Favs: 42 - Follows: 36 - Updated: 2/15/2007 - Published: 12/16/2006 - Carson B., John S. - Complete
The Ghosts of Atlantis by Reyson reviews
Mysterious ghosts are appearing in Atlantis trying to harm its inhabitants. The race is on to solve the mystery and save Sheppard, McKay, Carson and others from murderous phantoms intend on taking lives. Many get whumped. COMPLETE
Stargate: Atlantis - Rated: T - English - Mystery/Angst - Chapters: 23 - Words: 91,699 - Reviews: 434 - Favs: 53 - Follows: 49 - Updated: 2/12/2007 - Published: 9/30/2006 - John S. - Complete
Pelage by LoveConquers reviews
Just how did Dr. Hewston find out Teyla has feelings for someone and who that someone is?
Stargate: Atlantis - Rated: K - English - Humor - Chapters: 1 - Words: 1,340 - Reviews: 13 - Favs: 6 - Follows: 2 - Published: 2/11/2007 - Teyla E. - Complete
Letters From Earth by Reefgirl reviews
Another WPBA Forum First Lines challenge. Dr Stirling's nieces decided to send a few letters to the Atlantis residents
Stargate: Atlantis - Rated: K+ - English - Humor - Chapters: 1 - Words: 1,226 - Reviews: 7 - Favs: 3 - Follows: 3 - Published: 2/10/2007 - Complete
How The Other Half Live by Satryicon reviews
This just wasn't John's day. [genderbender] [Chapter 2 up]
Stargate: Atlantis - Rated: K+ - English - Humor - Chapters: 2 - Words: 1,172 - Reviews: 13 - Favs: 3 - Follows: 10 - Updated: 1/24/2007 - Published: 11/11/2006 - John S.
The Known World by skypig21 reviews
Imprisoned by a cruel and repressive government, John, Rodney and Teyla are forced to make sacrifices to save each other's lives and keep the flame of hope burning. Warning: Very lightly implied noncon. Also, bugs.
Stargate: Atlantis - Rated: T - English - Drama/Adventure - Chapters: 21 - Words: 52,982 - Reviews: 423 - Favs: 89 - Follows: 63 - Updated: 1/24/2007 - Published: 12/21/2006 - John S., Rodney M. - Complete
Avatar by theEOWs reviews
She’s mad as a hornet and isn’t going to take it anymore. Atlantis encounters a resident just waiting for Daddy to come home. Cowritten by Stealth Dragon and drufan. You know there’s gotta be whump!
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 13 - Words: 35,736 - Reviews: 159 - Favs: 47 - Follows: 31 - Updated: 1/23/2007 - Published: 1/11/2007 - John S. - Complete
Act of Desperation by Titan5 reviews
When John is trapped without food or water, he must take drastic steps to free himself.
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 6 - Words: 19,756 - Reviews: 188 - Favs: 39 - Follows: 30 - Updated: 1/18/2007 - Published: 1/14/2007 - Complete
Heartbeat by Stealth Dragon reviews
“There are some things you can't hallucinate.”
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 1 - Words: 6,924 - Reviews: 50 - Favs: 31 - Follows: 2 - Published: 1/13/2007 - John S., Elizabeth W. - Complete
Surely You Joust by Titan5 reviews
John takes up a new sport, one he's not particularly fond of.
Stargate: Atlantis - Rated: K+ - English - Humor - Chapters: 1 - Words: 4,905 - Reviews: 32 - Favs: 15 - Follows: 1 - Published: 1/13/2007 - Complete
Visions From the Past by lorrie reviews
A trip to the mainland uncovers secrets from John's past. Final chapter of this segment is up.
Stargate: Atlantis - Rated: T - English - Adventure/Drama - Chapters: 6 - Words: 9,451 - Reviews: 28 - Favs: 11 - Follows: 32 - Updated: 1/12/2007 - Published: 10/9/2006 - John S., Elizabeth W.
Darkness Runs Deep by SGAFan reviews
Sheppard is captured by an unknown threat. Will his team find him in time? Warning: dark fic and Sheppard whumping! Rated T for now.
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 14 - Words: 40,846 - Reviews: 236 - Favs: 82 - Follows: 57 - Updated: 1/8/2007 - Published: 10/14/2006 - John S., Ronon D. - Complete
What Dreams May Come by AV21 reviews
Rodney paused in his incessant poking of John’s head to holler “Carson, I think he’s still broken!” John flopped over with his back towards Rodney, and muttered, “Show you who’s broken.”
Stargate: Atlantis - Rated: K+ - English - Angst/Drama - Chapters: 10 - Words: 15,264 - Reviews: 66 - Favs: 29 - Follows: 27 - Updated: 1/8/2007 - Published: 12/30/2006 - John S., Teyla E. - Complete
Into the Light by Merlin71 reviews
John is seeing things. Or is he?
Stargate: Atlantis - Rated: K+ - English - Chapters: 1 - Words: 14,508 - Reviews: 18 - Favs: 23 - Follows: 2 - Published: 1/7/2007 - John S. - Complete
Nobody said it was easy by Kodiak Bear Country reviews
Sheppard and McKay are trapped in a cave Sheppard reflects on how he got to where he is on his birthday.
Stargate: Atlantis - Rated: T - English - Chapters: 1 - Words: 6,516 - Reviews: 51 - Favs: 32 - Follows: 2 - Published: 1/5/2007 - John S. - Complete
Nowhere Warm by chokolaj reviews
Shep’s shot, slowly bleeding out in the snow, with only his radio to keep him connected to those he cares about most.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 2 - Words: 6,102 - Reviews: 36 - Favs: 48 - Follows: 9 - Updated: 12/28/2006 - Published: 12/26/2006 - Complete
Haunted by Daring Duo reviews
A tag to Phantoms in which John is haunted by lingering effects of the Wraith device.
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 28 - Words: 57,109 - Reviews: 367 - Favs: 45 - Follows: 49 - Updated: 12/27/2006 - Published: 12/1/2006 - Complete
Dandelions by honeybadgerhook reviews
Someone sends Elizabeth flowers. Someone disappears off-world. Someone doesn't make it. (Written from a Shep/Weir challenge prompt: "something with a lot of angst that doesn't end well".)
Stargate: Atlantis - Rated: K+ - English - Angst/Romance - Chapters: 1 - Words: 2,328 - Reviews: 25 - Favs: 12 - Follows: 6 - Published: 12/22/2006 - Elizabeth W., John S. - Complete
Star Gazing by Stealth Dragon reviews
Sometimes you don't get what you ask for when you want it, you get it when you need it.
Stargate: Atlantis - Rated: K - English - Chapters: 1 - Words: 4,061 - Reviews: 39 - Favs: 11 - Follows: 1 - Published: 12/20/2006 - John S. - Complete
Blood Rituals by Ruse reviews
COMPLETE: The gang gate to a world with a deadly secret—will Sheppard and Beckett become victims of genetic exploitation? Sheppard and Carson whump.
Stargate: Atlantis - Rated: T - English - Horror/Suspense - Chapters: 10 - Words: 27,665 - Reviews: 114 - Favs: 32 - Follows: 39 - Updated: 12/15/2006 - Published: 11/20/2006 - John S., Carson B. - Complete
In the Pale Moonlight by Jersey13 reviews
Beckett, McKay, and Sheppard are prisoners of the Wraith, and are struggling just to survive as Beckett's own research in genetic manipulation is being used against them! Gen, Team DarkFic
Stargate: Atlantis - Rated: T - English - Horror/Suspense - Chapters: 14 - Words: 31,483 - Reviews: 69 - Favs: 20 - Follows: 26 - Updated: 12/14/2006 - Published: 11/8/2006 - Carson B., John S. - Complete
Survival Course by b7-kerravon reviews
First season, after 'Defiant One', with spoilers for episodes up to that point. Shepwhump, pure and simple. Well, some McKay angst, too. Complete!
Stargate: Atlantis - Rated: K - English - Adventure - Chapters: 6 - Words: 16,147 - Reviews: 144 - Favs: 53 - Follows: 36 - Updated: 12/2/2006 - Published: 11/27/2006 - John S., Rodney M. - Complete
British Invasion by ancientmaverick reviews
Dr. Jillian Abbot appears to be the perfect addition to Atlantis, but chaos ensues when she is revealed to be hiding something. Shep whump eventually, CarsonOC pairing. NOW COMPLETE! Former title: Oh Baby!
Stargate: Atlantis - Rated: T - English - Adventure/Mystery - Chapters: 30 - Words: 41,065 - Reviews: 95 - Favs: 13 - Follows: 19 - Updated: 11/29/2006 - Published: 8/15/2006 - Carson B., John S. - Complete
Mindscape by illman reviews
A mysterious attacker is roaming Atlantis and soon John falls under suspicion. Post The Hive. COMPLETE
Stargate: Atlantis - Rated: T - English - Chapters: 15 - Words: 50,147 - Reviews: 49 - Favs: 6 - Follows: 15 - Updated: 11/21/2006 - Published: 7/11/2006 - Complete
Difficult choices by Linnzi reviews
Inspired by a wonderful Carson vid I saw on lj, this looks at Carson's decisions, his difficult choices and naturally contains Shep whump...
Stargate: Atlantis - Rated: T - English - Chapters: 1 - Words: 2,228 - Reviews: 23 - Favs: 33 - Follows: 1 - Published: 10/10/2006 - Carson B., John S. - Complete
Hound of Hell you Cry by Stealth Dragon reviews
Sheppard is stranded on a strange world where people are vanishing, and the team races to find him... and not having much luck at it.
Stargate: Atlantis - Rated: T - English - Adventure/Mystery - Chapters: 27 - Words: 149,812 - Reviews: 550 - Favs: 78 - Follows: 33 - Updated: 10/6/2006 - Published: 8/28/2006 - John S. - Complete
Behind Enemy Eyes by Splitbeak reviews
Feeling angry and betrayed by the Lanteans, Michael exacts justice in the most poetic way possible... by turning Sheppard into a Wraith, as he was turned into a human.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 8 - Words: 25,052 - Reviews: 100 - Favs: 45 - Follows: 29 - Updated: 9/7/2006 - Published: 8/10/2006 - John S., Carson B. - Complete
Inhuman by Maggie Sheppard reviews
Sheppard enters the event horizon after giving Elizabeth his usual boyish smile. She smiles back, not knowing that may be the last time she will see him smile. REPOSTED WITH SOME ADDITIONS AND GRAMMAR CORRECTIONS!
Stargate: Atlantis - Rated: M - English - Angst/Adventure - Chapters: 4 - Words: 71,179 - Reviews: 30 - Favs: 14 - Follows: 10 - Updated: 7/22/2006 - Published: 10/17/2005 - John S. - Complete
Captured by tear of the sun girl reviews
John and Teyla are kidnapped by the Wraith and nobody can help them without being caught themselves what will happen to them?
Stargate: Atlantis - Rated: T - English - Romance/Drama - Chapters: 5 - Words: 4,809 - Reviews: 14 - Favs: 8 - Follows: 6 - Updated: 1/3/2006 - Published: 12/13/2005 - John S., Teyla E. - Complete
Not for anything or anyone by MadCapSciFiWriter reviews
Teyla worries about John and his desire to return to Earth.
Stargate: Atlantis - Rated: K - English - Romance - Chapters: 1 - Words: 1,233 - Reviews: 8 - Favs: 10 - Follows: 1 - Published: 10/21/2005 - Teyla E., John S.
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