What if when Naruto and Sasuke's jutsu collided, it opened a wormhole that sucked Naruto in and sent him to Aether where the Luminoth find and heal him using the Light of Aether. Later on, he catches the attention of both the Ing and the Space Pirates when he uses the Kyuubi's power and they try to capture him to bring that power under their control, causing him to flee to the Grand Temple where then he trained to defeat them before learning of the Light Of Aether being stolen from the Temples. This causes him to train harder to find the Energy Transfer Module and bring the Light back from the Dark Temples when the Marines arrive and he ends up watching them having not seen another human Being for the past two years. His training ends the second Samus arrives and acquires the ETM and what happens next is up to you. Naruto still can summon toads which how he keeps everyone in Konaha informed on him, however he's trying to find out how to get back using the Portals. Naruto can also use Light as a weapon due to the Light Of Aether turning his chakra into Light Chakra.