I mainly write CSI and CSI: Miami fics. Most of my ships for these shows have been shot to you know where though. The ones I still actively ship are Rave (Ryan/Valera, Miami); Grey (Greg/Riley, LV - even if Riley isn't on the show anymore); Cath/Vartann (L V) and Nick/Mandy (LV). I used to ship Cake (Jake/Calleigh, Miami) and Eden (Eric/Natalia, Miami)... I still do on occasion.
I also write fanfiction for Supernatural. Mostly the Destiel (Dean/Castiel) pairing. :)
I also ship Mary/Marshall on In Plain Sight. Haven't yet written a fic for this show yet, but I may soon.
Just a general reminder: Please remember to put up the proper warnings for your fics/chapters (preferably in the shot summary that appears under the fic's title on the fic list page). For a few examples:
1). Warnings should be put up if the fics contain character deaths
2). And if it contains incest, then please put warnings for those (even if its just hinted at - some people may still be uncomfortable reading those... and some people have good reasons for why it makes them uncomfortable).
3). And if your fic is in the romance category/sub-category, please make it known what the pairing is (especially if the pairing includes an original character).