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Joined 12-01-09, id: 2164365, Profile Updated: 07-03-10
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In the Shadow of Your Heart by firedew reviews
Set after the events of "Finding My Way" in AU of Season 5, John and Teyla are expecting their first child together, but Pegasus isn't finished with them. Will they be able to face what's coming? Will their relationship survive? Warnings: Violence, Sexual content. Pairings: John/Teyla, Ronon/Keller/OC
Stargate: Atlantis - Rated: M - English - Drama/Romance - Chapters: 40 - Words: 248,025 - Reviews: 302 - Favs: 47 - Follows: 74 - Updated: 7/6 - Published: 4/22/2012 - John S., Teyla E.
Father Figure by Amycat8733 reviews
Every boy needs a father figure and John is Torren's. Kanaan, however, isn't ready to give up his title. When he decides to do something about it, things get ugly. Falls between Meeting Minds and Lightning Strikes. Rated M for violence and language. J/T. Gen, H/C, romance, family, angst. Shep whump and a dab of Torren whump.
Stargate: Atlantis - Rated: M - English - Hurt/Comfort - Chapters: 5 - Words: 12,765 - Reviews: 39 - Favs: 18 - Follows: 30 - Updated: 5/12 - Published: 7/13/2014 - [John S., Teyla E.] Rodney M., Ronon D. - Complete
Blood of the Heir by alicesandra reviews
Sequel to 'The Legacy of Janus'. Set post season 5. Colonel John Sheppard is forced to return to Earth when his brother's life is in jeopardy, but where is he? John is forced to go 'dark' to find him. But nothing, and no one, is ever as it seems….
Stargate: Atlantis - Rated: T - English - Family/Adventure - Chapters: 29 - Words: 256,848 - Reviews: 447 - Favs: 91 - Follows: 147 - Updated: 4/10 - Published: 6/24/2013 - John S., David S./Sheppard - Complete
When in Rome by Stargatefriends reviews
Team Sheppard travels to Belosia where they discover the origin of the Minotaur, but with everything the Ancients did, the truth is worse than the fiction. Round Robin fic written by Kariesue, kickstand75, firedew, Mysra, and Amycat 8733. John/Teyla. Updates every Saturday.
Stargate: Atlantis - Rated: M - English - Adventure/Romance - Chapters: 16 - Words: 105,605 - Reviews: 126 - Favs: 19 - Follows: 24 - Updated: 3/29 - Published: 12/20/2014 - Rodney M., John S., Teyla E., Ronon D. - Complete
In another galaxy by fsdg2011 reviews
Post episode "The Return part 2". Atlantis was saved, but Sheppard got reassigned. AU. Spoilers for "The Return part 1", "The Return part 2".
Stargate: Atlantis - Rated: T - English - Adventure/Drama - Chapters: 4 - Words: 6,464 - Reviews: 22 - Favs: 4 - Follows: 13 - Updated: 3/8 - Published: 2/6 - Rodney M., John S.
Some Corner of a Foreign Field by neela reviews
With a Wraith superhive about to attack Atlantis, Colonel Samantha Carter had hoped for reinforcements from Earth. Instead she got refugees from an abandoned SGC and the message that Earth is lost. Apoca!fic. AU post-EatG. Includes characters from SG-1. [NOW COMPLETE] [Ch. 5, 7 & 8 edited July 2015]
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 29 - Words: 250,303 - Reviews: 177 - Favs: 92 - Follows: 146 - Updated: 2/28 - Published: 11/9/2009 - [John S., S. Carter/Sam] Steven C., OC - Complete
Scarecrow In Winter by Sterenyk Strey reviews
'What they'd done to him, he, McKay and Teyla, was tantamount to torture and betrayal. Then along came Kavanagh.' Will John Sheppard survive long enough to forgive? And remember? Shep whump/team angst. XD
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 15 - Words: 98,512 - Reviews: 163 - Favs: 20 - Follows: 45 - Updated: 2/27 - Published: 7/13/2013 - Rodney M., John S., Teyla E., Ronon D.
Reflections and Conclusions by Kariesue reviews
John and Teyla get ready to welcome their new child. What does life have in store for them now? The finale of my 'R and ' universe. Begins shortly after 'Recreation and Vindication'.
Stargate: Atlantis - Rated: M - English - Family/Romance - Chapters: 18 - Words: 89,711 - Reviews: 236 - Favs: 63 - Follows: 93 - Updated: 2/2 - Published: 8/10/2013 - John S., Teyla E.
The Hallowed and The Lost by readergirl1013 reviews
It surprises him when he stumbles across it by accident. It is, to be honest, the last thing he expects to find in a land as devoted to science and hard facts as Atlantis is. But here he stands, at a door to a hall that is guarded ceremonially, but faithfully, by two men, solemn and firm in their duty. A story of tolerance and equality, and remembering those who fought for freedom.
Stargate: Atlantis - Rated: K+ - English - Spiritual - Chapters: 1 - Words: 7,706 - Reviews: 6 - Favs: 4 - Follows: 1 - Published: 1/5 - Complete
Circles in the Dust, Part 5 of the Deliverance arc by shepsgirl72 reviews
Sheppard once more faces his nemesis in a battle to outwit and out class her and keep the timeline on track. Sarayah, of course, has other plans - plans that could change both past and future alike! Shep Whump (of course) and trouble for all the team.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Sci-Fi - Chapters: 78 - Words: 558,527 - Reviews: 856 - Favs: 24 - Follows: 36 - Updated: 12/8/2014 - Published: 7/23/2013 - Rodney M., John S., Teyla E., Ronon D. - Complete
Evander's Heir III: The Wrath of Armentarius by ShepsReyna reviews
The third segment of Sheppard and team adventures where Sheppard continues to acquire powers and begins to organize against the Wraith. An A/U explanation of Sheppard's gene abilities or what could have been. Some profanity and violence.
Stargate: Atlantis - Rated: K+ - English - Adventure/Hurt/Comfort - Chapters: 10 - Words: 48,833 - Reviews: 203 - Favs: 97 - Follows: 152 - Updated: 12/1/2014 - Published: 7/14/2010 - John S.
Exploration in the Pegasus Galaxy by sartiebodyshots reviews
Sam Carter loves a lot of things, but she's an explorer at heart.
Stargate: Atlantis - Rated: K - English - Romance - Chapters: 1 - Words: 732 - Reviews: 5 - Favs: 6 - Follows: 1 - Published: 11/29/2014 - John S., S. Carter/Sam - Complete
Westward to Pegasus by Space-Age Scribe reviews
John Sheppard arrived in Pegasus Valley simply wanting a fresh start in life after finally ending his military career back East. He never expected to find a family in the people of Atlantis ... or that his worst nightmare had preceded him. Western AU.
Stargate: Atlantis - Rated: K+ - English - Friendship/Drama - Chapters: 27 - Words: 39,318 - Reviews: 119 - Favs: 15 - Follows: 15 - Updated: 11/9/2014 - Published: 8/24/2014 - John S., Ronon D., Teyla E. - Complete
Dreaming Wide Awake by firedew reviews
Sequel to "Frozen in Place". With her life coming to a painful and untimely end, Teyla stepped into the stasis pod never expecting to open her eyes on the world again. Then one day she did. John/Teyla
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Romance - Chapters: 8 - Words: 33,395 - Reviews: 95 - Favs: 15 - Follows: 21 - Updated: 11/9/2014 - Published: 4/26/2014 - John S., Teyla E.
Bullets, Plural by water4willows reviews
"The passageway he folds in is dark. The only light to be seen is the lazy muted white the flashlight at the end of his P90 throws off from its place on the floor near his feet - the place where it landed after he body checked McKay out of the way." Unabashed Sheppard Whump. A one-shot rated T for some language.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 1 - Words: 11,926 - Reviews: 34 - Favs: 28 - Follows: 5 - Published: 10/27/2014 - John S. - Complete
The Other Gift of Life by nacimynom reviews
John Sheppard is recovering from being stabbed by the alien entity that had taken over Jennifer Keller's body in "The Seed" season 5 episode. He receives an urgent message from Earth. It's about his brother Dave. This is the extended version of a story written for the Sheppard/HC Winter Fic Exchange.
Stargate: Atlantis - Rated: T - English - Drama/Hurt/Comfort - Chapters: 5 - Words: 18,222 - Reviews: 75 - Favs: 50 - Follows: 121 - Updated: 9/1/2014 - Published: 1/23/2014 - John S., Teyla E., Ronon D., David S./Sheppard
Guardians by WriterJC reviews
Team Sheppard returns from a search & rescue mission with one of their own fighting for his life. But at least the rescue was a success. Or was it? Follows on from 'The Guardian'
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Adventure - Chapters: 8 - Words: 19,496 - Reviews: 54 - Favs: 15 - Follows: 45 - Updated: 6/1/2014 - Published: 3/5/2011 - John S., Rodney M.
Fracture Points by ArtisticAbandon reviews
A debriefing is a debriefing until its an interrogation. Or, the story about how to break and still stay whole. (Written for the LJ Sheppard HC Community 2013 Winter Fic Exchange, for stellapegasi)
Crossover - Stargate: Atlantis & Stargate: SG-1 - Rated: T - English - Hurt/Comfort/Suspense - Chapters: 6 - Words: 15,216 - Reviews: 22 - Favs: 4 - Follows: 8 - Updated: 3/13/2014 - Published: 1/26/2014 - John S., C. Mitchell - Complete
Under Control by Mysra reviews
Sequel to Building a New Life. Atlantis returns home, but as always things go downhill very fast and John Sheppard's life is threatened by an old enemy. But who is the true villain? Will he be rescued in time? What has Todd to do with everything? Whump for Sheppard and team. Rated M for Violence in later chapters and some steam in the beginning. JT pairing. ##Chapter 10 rewritten##
Stargate: Atlantis - Rated: M - English - Angst/Hurt/Comfort - Chapters: 11 - Words: 47,750 - Reviews: 88 - Favs: 26 - Follows: 18 - Updated: 2/3/2014 - Published: 6/29/2013 - John S., Teyla E. - Complete
DÉTENTE by stella-pegasi reviews
A routine mission uncovers a horrifying secret and leads the team to a mysterious planet, a military coup, and an Ancient mystery.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 1 - Words: 33,269 - Reviews: 10 - Favs: 17 - Follows: 5 - Published: 1/24/2014 - Rodney M., John S., Teyla E., Ronon D. - Complete
Bad Wolf by Roo1965 reviews
Bad dreams affected more personnel than we saw. How they dealt with it depended on their situation, life experience and the support system of friends, colleagues and SGC medical protocols. What if Dr Heightmeyer was someone's coping mechanism? John's right to be worried about what his bad self did in dreamland... Set around Doppelganger 4.4. Genfic for Shep HC-LJ Winterfic 2013
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 9,585 - Reviews: 5 - Favs: 4 - Follows: 2 - Published: 1/23/2014 - Rodney M., John S., Jennifer K. - Complete
Forget Me Not by Amycat8733 reviews
After an accident steals Teyla's memory, will she be able to remember their present… or will the device that stole their past destroy their future? Takes place before Thunder Rolls during season 6. Whump to go around, romance, drama and a bit of angst. Contains J/T, sentient Atlantis.
Stargate: Atlantis - Rated: M - English - Hurt/Comfort/Romance - Chapters: 7 - Words: 18,843 - Reviews: 61 - Favs: 21 - Follows: 21 - Updated: 1/9/2014 - Published: 9/28/2013 - John S., Teyla E. - Complete
Aftermath by T'Pring reviews
John returns to Atlantis after a harrowing mission and someone is watching.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 1 - Words: 2,627 - Reviews: 33 - Favs: 21 - Follows: 3 - Published: 1/7/2014 - John S. - Complete
Road Trip by stella-pegasi reviews
The boys take thirty-days leave and set off to see the sights. What could possibly go wrong on vacation? (Please note: For the most part each chapter is contained to one location and the story arc is complete within each. Road Trip began to take a life of its own at some point and became this epic length. And yes... I'm going to finish this... almost halfway done.)
Stargate: Atlantis - Rated: K+ - English - Friendship/Hurt/Comfort - Chapters: 12 - Words: 154,798 - Reviews: 221 - Favs: 72 - Follows: 116 - Updated: 12/23/2013 - Published: 2/27/2011 - Rodney M., John S.
Hands by KellethMetheus reviews
John Sheppard contemplates his hands and his future.
Stargate: Atlantis - Rated: K - English - Family/Hurt/Comfort - Chapters: 1 - Words: 956 - Reviews: 7 - Favs: 6 - Published: 9/26/2013 - John S. - Complete
The Long Way Home by Aphina reviews
It was a journey John Sheppard just had to make. Series 1 Onwards
Stargate: Atlantis - Rated: M - English - Adventure/Romance - Chapters: 201 - Words: 401,433 - Reviews: 846 - Favs: 65 - Follows: 65 - Updated: 9/10/2013 - Published: 4/25/2011 - John S.
Let's Make A Deal by sheppardlover928 reviews
The team go on an important trading mission, but one important find gives way to another and John finds he is of special interest to one of the trader's.
Stargate: Atlantis - Rated: K+ - English - Drama/Hurt/Comfort - Chapters: 20 - Words: 28,466 - Reviews: 163 - Favs: 20 - Follows: 43 - Updated: 9/4/2013 - Published: 11/24/2012 - John S. - Complete
Cauldron by stella-pegasi reviews
Sheppard and McKay go off-world to investigate an Ancient Outpost located on a world harboring a secret.
Stargate: Atlantis - Rated: K+ - English - Adventure/Hurt/Comfort - Chapters: 1 - Words: 10,536 - Reviews: 13 - Favs: 15 - Follows: 1 - Published: 9/2/2013 - John S., Ronon D., E. Lorne - Complete
The Bet, the Mission and the Ex by Mysra reviews
Sequel to 'Good or Bad, Take your Pick' Story takes off directly after. After a relaxing vacation on Maui. John and Teyla return home happy, but will it stay that way? A simple Bet between Rodney and Maj. Lorne lead into trouble and to complicate things further John's Ex shows up with an agenda of her own. Whump, fluff, steam and jealousy ensue. Have fun and enjoy.
Stargate: Atlantis - Rated: M - English - Hurt/Comfort/Angst - Chapters: 20 - Words: 41,121 - Reviews: 107 - Favs: 15 - Follows: 15 - Updated: 6/22/2013 - Published: 5/8/2013 - Rodney M., John S., Teyla E., Ronon D. - Complete
Silver Wings by Amycat8733 reviews
Ever wondered how Lorne and Sheppard met, and how Lorne ended up as Sheppard's Executive Officer in Atlantis? Well, here's my take on how our two flyboys meet...
Stargate: Atlantis - Rated: T - English - Adventure/Friendship - Chapters: 4 - Words: 7,878 - Reviews: 80 - Favs: 66 - Follows: 48 - Updated: 6/14/2013 - Published: 5/25/2013 - John S., E. Lorne - Complete
Lightning Strikes by Amycat8733 reviews
A lightning bolt brings change to John Sheppard. His bond with the city deepens, bringing its own hazards. Friendship is tested as Rodney and John clash over his new strength. As John's abilities change, change also comes to Atlantis. Warning: John/Teyla, Sentient Atlantis. Drama, romance, whump, h/c, team, angst, friendship
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 30 - Words: 77,059 - Reviews: 267 - Favs: 126 - Follows: 148 - Updated: 6/11/2013 - Published: 6/27/2012 - [John S., Teyla E.] Rodney M. - Complete
The Legacy of Janus by alicesandra reviews
Set post Season Five. Atlantis is now back on Earth, and our intrepid explorers now seem to be able to enjoy some downtime. Until Dr Rodney McKay detects a strange energy reading coming from within Atlantis itself, which threatens more than just the Ancient City. Can our SGA-1 team save the day again? Or is this beyond even them?
Stargate: Atlantis - Rated: T - English - Adventure/Friendship - Chapters: 27 - Words: 165,623 - Reviews: 383 - Favs: 123 - Follows: 98 - Updated: 5/31/2013 - Published: 3/11/2013 - John S. - Complete
Home is Where the Heart by T'Pring reviews
Over his objections, John is sent home to recover from a severe concussion. Sure enough, he finds his stay (banishment?) with his brother anything but restful. At least he'll be able to tell Carter "I told you so"... Now complete
Stargate: Atlantis - Rated: M - English - Hurt/Comfort/Romance - Chapters: 12 - Words: 63,010 - Reviews: 218 - Favs: 80 - Follows: 59 - Updated: 5/15/2013 - Published: 4/23/2013 - John S., David S./Sheppard - Complete
This Never Happened to Captain Kirk by nacimynom reviews
Early in a relationship with Teyla, John becomes the prisoner of a powerful person who has an unhealthy obsession for him. He must escape before his captor's unwanted attention maims him, kills him or breaks him. But escape may be the easy part.
Stargate: Atlantis - Rated: M - English - Hurt/Comfort/Drama - Chapters: 33 - Words: 106,466 - Reviews: 186 - Favs: 41 - Follows: 37 - Updated: 4/7/2013 - Published: 3/31/2012 - John S., Teyla E. - Complete
Just Another Day for John & Lexi, Part 2 by J loves JS reviews
It's never easy on Atlantis, especially when you're in a relationship with Colonel John Sheppard and just so happen to be the base's head shrink. But it's not all bad.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Romance - Chapters: 22 - Words: 89,333 - Reviews: 47 - Favs: 12 - Follows: 20 - Updated: 3/31/2013 - Published: 1/29/2010 - John S. - Complete
Being a Father by A11y50n reviews
TJ is acting weird and John has to figure out why.
Stargate: Atlantis - Rated: K - English - Family/Hurt/Comfort - Chapters: 1 - Words: 3,141 - Reviews: 3 - Favs: 11 - Follows: 2 - Published: 3/29/2013 - John S., Torren J. E. - Complete
A Time of Change by Wedjatqi reviews
Set post season 5 - Once Atlantis is back in Pegasus, Teyla's social life begins to change in ways she had never predicted. John/Teyla. M. Written for the Beya Secret Elf Christmas Challenge.
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 11 - Words: 54,204 - Reviews: 133 - Favs: 35 - Follows: 33 - Updated: 2/19/2013 - Published: 12/30/2012 - John S., Teyla E.
Frozen in Place by firedew reviews
Everyone deals with loss in their own way. Years behind him and a decision made, John looks back.
Stargate: Atlantis - Rated: K+ - English - Tragedy/Romance - Chapters: 1 - Words: 4,581 - Reviews: 20 - Favs: 9 - Follows: 2 - Published: 2/7/2013 - John S., Teyla E. - Complete
T is for Team, T is for Trust by Titan5 reviews
Sheppard's team changes over the years, but they will always be important to him and he will always strive to protect them.
Stargate: Atlantis - Rated: T - English - Friendship/Hurt/Comfort - Chapters: 1 - Words: 12,294 - Reviews: 13 - Favs: 20 - Follows: 4 - Published: 1/27/2013 - John S. - Complete
Saving Sheppard by T'Pring reviews
Sometimes it's the little choices that make the big differences. Sheppard's friends and family try to save him, in their own ways, for their own reasons... Written for the LJ SheppardHC Secret Santa Exchange. Complete!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Drama - Chapters: 8 - Words: 19,142 - Reviews: 104 - Favs: 72 - Follows: 28 - Updated: 1/21/2013 - Published: 1/16/2013 - John S., David S./Sheppard - Complete
Brothers by Amycat8733 reviews
After the events on Sateda, Ronon wishes to show his thanks by honoring a member of the expedition, but who is it? Told from Shep's POV.
Stargate: Atlantis - Rated: T - English - Friendship - Chapters: 1 - Words: 2,657 - Reviews: 15 - Favs: 30 - Follows: 5 - Published: 1/21/2013 - John S., Ronon D. - Complete
Building a New Life by Mysra reviews
Sometimes life cheats on you and you have to watch the love of your life choose another and sometimes live is good and things are not what they seem. John would rather live a unhappy life watching Teyla and Kanaan than losing Teyla. But when Kanaan stays on Athos more often John has to risk his heart showing Teyla that Atlantis is where she belongs. Before she follows Kanaan.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Romance - Chapters: 18 - Words: 85,389 - Reviews: 133 - Favs: 45 - Follows: 33 - Updated: 1/19/2013 - Published: 11/7/2012 - John S., Teyla E. - Complete
Over the Edge by Space-Age Scribe reviews
Tag to 3x09 - 'Phantoms'. The device had been disabled and the Daedalus was on its way. The mission was over, and now the survivors could limp home to recover. But for John Sheppard, the problems caused by the Wraith device back on the planet were just beginning.
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Friendship - Chapters: 15 - Words: 18,387 - Reviews: 96 - Favs: 25 - Follows: 21 - Updated: 1/15/2013 - Published: 1/3/2013 - John S., Teyla E. - Complete
Misdirection by ArtisticAbandon reviews
Never trust uninhabited planets and natives who have the advantage of home ground. Or, the reason why Rodney never thought John would remember his password. Team fic. Shep whump. For TPring, thru H/C secret santa 2012.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 1 - Words: 18,278 - Reviews: 8 - Favs: 10 - Published: 1/15/2013 - Rodney M., John S., Ronon D., Teyla E. - Complete
The Gift of Giving by LanteanBreeze reviews
On a cold December morning, the team reminisces over breakfast about the holidays. This happens sometime between season 5's Vegas and Enemy At The Gate episodes. Written for SGA Santa's 2012 Exchange.
Stargate: Atlantis - Rated: K - English - Friendship/Sci-Fi - Chapters: 1 - Words: 2,705 - Reviews: 7 - Favs: 2 - Follows: 1 - Published: 1/3/2013 - Complete
Bonds by SGAFan reviews
When Ronon requests time off to go on a ritual hunt, John accompanies him. What could possibly go wrong? Written for the Sheppard HC (LJ) Secret Santa Fic Exchange 2012.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 15,504 - Reviews: 21 - Favs: 29 - Published: 12/27/2012 - John S., Ronon D. - Complete
The Colonel's Daughter by crazywriter10 reviews
Through a series of mishaps, John and the daughter he didn't know he had are reunited. And it changes everything.
Stargate: Atlantis - Rated: K+ - English - Drama - Chapters: 17 - Words: 105,754 - Reviews: 115 - Favs: 85 - Follows: 108 - Updated: 11/23/2012 - Published: 5/10/2009 - John S.
Hope Is A Waking Dream by scifi-karis reviews
This is a tag to pilgrim soul's story, "No Distance Left To Run." Sheppard is not dead, but has been captured by the enemy. Trapped on a world in which he cannot escape and knowing his team believes he is dead, Sheppard is on the run with no team, no backup, and no chance of rescue. Shep whump. Please read "No Distance Left To Run" by pilgrim soul first!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 18 - Words: 25,960 - Reviews: 123 - Favs: 27 - Follows: 23 - Updated: 11/4/2012 - Published: 10/7/2012 - John S.
Today is Monday by karasel reviews
Alternate Ending to EatG where Atlantis does not get there in time and all mourn John's loss. Teyla begins to have strange and realistic dreams of him while The Trust enjoy their newest acquisition and his unique skills.
Stargate: Atlantis - Rated: M - English - Angst/Drama - Chapters: 25 - Words: 142,145 - Reviews: 154 - Favs: 35 - Follows: 17 - Updated: 9/16/2012 - Published: 8/31/2012 - John S., Teyla E. - Complete
SANCTORIUM by sheppardlover928 reviews
There's a room on Atlantis the Ancients labelled 'Sanctorium' Its a place they used often. Rodney wants to find out why, but its John who must deal with the consequences of their discovery.
Stargate: Atlantis - Rated: K - English - Chapters: 49 - Words: 71,886 - Reviews: 390 - Favs: 37 - Follows: 45 - Updated: 9/11/2012 - Published: 3/18/2012 - John S. - Complete
Chasing Hope by River's Dream reviews
Alone, injured, and on the run. Who is this stranger and what is his story
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 24 - Words: 52,712 - Reviews: 110 - Favs: 26 - Follows: 55 - Updated: 7/8/2012 - Published: 7/25/2010 - John S. - Complete
Grit by SGAFan reviews
When a routine mission goes wrong, John and his team find out that sometimes in the wilds of the Pegasus galaxy, you're not always on the top of the food chain. Written for LJ GenFicAThon 2012. Team Gen Story.
Stargate: Atlantis - Rated: K+ - English - Adventure - Chapters: 1 - Words: 11,000 - Reviews: 20 - Favs: 25 - Follows: 6 - Published: 6/25/2012 - John S. - Complete
Mr and Mrs by Kariesue reviews
While in San Francisco, John and Teyla go undercover for the military. Will their new roles change things for them? And how much will be pretend?
Stargate: Atlantis - Rated: M - English - Adventure/Romance - Chapters: 19 - Words: 93,798 - Reviews: 227 - Favs: 62 - Follows: 25 - Updated: 6/23/2012 - Published: 6/15/2012 - John S., Teyla E. - Complete
Beyond the Fire by mystica88 reviews
"What comes after fire I wonder? You know, 'Out of the frying pan, into the fire…' because we're beyond the fire now." Sheppard and McKay are captured and put through the wringer by some unknown assailant. friendship only.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 7 - Words: 34,352 - Reviews: 46 - Favs: 23 - Follows: 20 - Updated: 6/23/2012 - Published: 5/19/2012 - Rodney M., John S. - Complete
With One Glance by nacimynom reviews
A more dramatic ending to "The Long Goodbye" episode with greater focus on the "he cares for you more than you know" line. It's my AU-take on how Teyla and John were affected by that revelation. This multi-chapter story, written for the 2012 Spring Fling "You Complete Me" SGA Beya challenge, is self-contained but it does directly follow my "More Than You Know" story.
Stargate: Atlantis - Rated: T - English - Drama/Romance - Chapters: 4 - Words: 6,857 - Reviews: 25 - Favs: 16 - Follows: 3 - Updated: 6/20/2012 - Published: 5/31/2012 - John S., Teyla E. - Complete
The Last Chance by stella-pegasi reviews
Arizona 1874: John Sheppard drifted from frontier town to frontier town seeking a new life. In Wickenburg, AZ he may have found his last chance. AU Cowboy!Shep
Stargate: Atlantis - Rated: M - English - Western/Romance - Chapters: 7 - Words: 47,422 - Reviews: 26 - Favs: 10 - Follows: 3 - Updated: 6/17/2012 - Published: 6/14/2012 - John S. - Complete
Assumptions and Expectations by shepsgirl72 reviews
From behind him a guttural growl rolled out, the emptiness of their barred cells only emphasising the threatening sound. Sheppard froze and Rodney's jittering and complaining instantly stopped, his eyes widening at the sound. 'I'll figure something out...I promise.' When meeting an advanced race of aliens the team discover things are not always what they seem...the hard way.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 4 - Words: 25,695 - Reviews: 67 - Favs: 15 - Follows: 10 - Updated: 6/8/2012 - Published: 6/5/2012 - John S., Rodney M. - Complete
The Tensions and The Passions by Wedjatqi reviews
Still dealing with the repercussions of their brief vision of their possible future together, John and Teyla find themselves thrown together alone in Hawaii. This is a sequel to my other fic 'A Different Future'. M. Complete.
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 11 - Words: 72,319 - Reviews: 67 - Favs: 27 - Follows: 10 - Updated: 6/6/2012 - Published: 6/1/2012 - John S., Teyla E. - Complete
The Connection by Kariesue reviews
John's bout with the Iratus retro-virus leaves him with some residual and unusual side effects.
Stargate: Atlantis - Rated: M - English - Drama/Adventure - Chapters: 9 - Words: 38,333 - Reviews: 56 - Favs: 34 - Follows: 9 - Updated: 6/5/2012 - Published: 6/1/2012 - Teyla E., John S. - Complete
Ancient Portal by danners3 reviews
John wakes up with a hot earth sun burning down on him, sand underneath him and little memory as to how he got there. His last memory is of embarking on a mission in the Pegasus Galaxy. How did he arrive back on earth, fifty years earlier?
Stargate: Atlantis - Rated: K+ - English - Drama/Romance - Chapters: 76 - Words: 143,780 - Reviews: 120 - Favs: 15 - Follows: 17 - Updated: 5/26/2012 - Published: 4/28/2012 - John S. - Complete
Broken Mirror by theicemenace reviews
What does a man do when he looks back at his life and sees a broken mirror?
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 14 - Words: 46,865 - Reviews: 140 - Favs: 13 - Follows: 14 - Updated: 4/22/2012 - Published: 3/6/2012 - John S. - Complete
Finding My Way by firedew reviews
John and Teyla struggle to repair their friendship when Teyla disobeys orders on a mission. Set in AU of Season 4 from Missing. Warning: Whump, Sexual content
Stargate: Atlantis - Rated: M - English - Drama/Romance - Chapters: 26 - Words: 89,260 - Reviews: 228 - Favs: 57 - Follows: 31 - Updated: 4/13/2012 - Published: 1/28/2012 - John S., Teyla E. - Complete
Renewing the Voice by Space-Age Scribe reviews
Maybe John Sheppard hadn't been healed as well as he originally thought. Epilogue to the SGA novel Blood Ties.
Stargate: Atlantis - Rated: K - English - Hurt/Comfort - Chapters: 1 - Words: 4,333 - Reviews: 9 - Favs: 12 - Published: 4/3/2012 - John S. - Complete
Attachment by Agrabah's Princess reviews
Post Lifeline John and the team go on their normal mission to another planet and find the village near the gate under attack by the Wraith... and a rather clingy 2 and a half year old. Eventual Sheyla
Stargate: Atlantis - Rated: T - English - Family/Romance - Chapters: 15 - Words: 33,439 - Reviews: 153 - Favs: 88 - Follows: 102 - Updated: 3/28/2012 - Published: 8/29/2007 - John S., Teyla E. - Complete
A Blessed Man by Cielito reviews
Post Season 5/John and Teyla; John had very little time but was hopeful for a lifetime with her.
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Drama - Chapters: 1 - Words: 1,090 - Reviews: 6 - Favs: 7 - Follows: 1 - Published: 3/22/2012 - John S., Teyla E. - Complete
Political Affairs by Cielito reviews
Now, standing against the large window of her suite, in a city that once she called home, Teyla marveled at its beauty but also at the turn of events since her last visit. Post Season 5 John/Teyla
Stargate: Atlantis - Rated: T - English - Drama/Romance - Chapters: 1 - Words: 3,913 - Reviews: 6 - Favs: 8 - Published: 3/22/2012 - Teyla E., John S. - Complete
Chapter 1 Warlord by rsharpe reviews
Summary and Title Page are in the beginning of Chapter 1.
Stargate: Atlantis - Rated: M - English - Adventure - Chapters: 7 - Words: 8,058 - Reviews: 9 - Favs: 2 - Follows: 4 - Updated: 3/17/2012 - Published: 3/1/2012 - John S.
JUSTICE by JoaniexJony reviews
When John is convicted of killing an innocent he has more to face than hard time. Serious Shep whump, and major angst for the team as John is sent to the worst prison in the Pegasus galaxy. Set in season 5. Keller is there, but Carson is the main doc.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 19 - Words: 60,540 - Reviews: 317 - Favs: 37 - Follows: 33 - Updated: 3/17/2012 - Published: 2/12/2012 - John S. - Complete
Recreation and Vindication by Kariesue reviews
John, Teyla and Torren go to Earth for a much needed vacation. What could possibly go wrong? Next sequel after 'Recriminations and Obligations'.
Stargate: Atlantis - Rated: M - English - Family/Drama - Chapters: 17 - Words: 92,476 - Reviews: 190 - Favs: 46 - Follows: 18 - Updated: 3/14/2012 - Published: 3/3/2012 - Teyla E., John S. - Complete
Vestige by mydaysrgreen reviews
In the midst of an unfamiliar world, Isabelle struggles to rebuild her life, while attempting to reacquaint herself with her job and possibly someone she once loved. John/OC
Stargate: Atlantis - Rated: T - English - Romance/Adventure - Chapters: 6 - Words: 25,813 - Reviews: 25 - Favs: 9 - Follows: 29 - Updated: 3/2/2012 - Published: 1/30/2011 - John S.
This Close by sheppardlover928 reviews
The SGA-1 team go to check out an Ancient facility that could house the secrets of ZPM technology. Sounds great, but of course, things dont always go as well as they'd like.
Stargate: Atlantis - Rated: K - English - Suspense/Hurt/Comfort - Chapters: 14 - Words: 15,861 - Reviews: 111 - Favs: 15 - Follows: 18 - Updated: 3/2/2012 - Published: 2/21/2012 - John S. - Complete
Dress Blues and Second Chances by Windimere Wellen reviews
What if Nancy still loved John?
Stargate: Atlantis - Rated: K - English - Angst - Chapters: 4 - Words: 17,058 - Reviews: 83 - Favs: 46 - Follows: 85 - Updated: 3/1/2012 - Published: 11/8/2010 - Nancy S., John S.
LEGOs and Love by scarlet79 reviews
John & Rodney spend a little time with Torren, and something strange happens. It seems that there may be more to the little boy than anyone realized. Get ready for a WEDDING! All *18* Chapters NOW UP!
Stargate: Atlantis - Rated: K+ - English - Family - Chapters: 18 - Words: 44,087 - Reviews: 133 - Favs: 33 - Follows: 33 - Updated: 3/1/2012 - Published: 1/7/2012 - Torren J. E., John S. - Complete
Miles To Go Before I Sleep by cate's corner reviews
A multi chapter story, following on from Doppelganger. John finds Evan sleepwalking again. It's the start of a troubling journey to find out why.
Stargate: Atlantis - Rated: K+ - English - Drama/Friendship - Chapters: 6 - Words: 7,335 - Reviews: 34 - Favs: 16 - Follows: 13 - Updated: 2/20/2012 - Published: 2/12/2012 - E. Lorne, John S. - Complete
Dance by puerta de las estrellas reviews
Written for Beya's Valentine Challenge. John & Teyla attend a diplomatic reception and learn more about each other than expected.
Stargate: Atlantis - Rated: T - English - Romance/Sci-Fi - Chapters: 1 - Words: 3,142 - Reviews: 16 - Favs: 5 - Follows: 2 - Published: 2/15/2012 - John S., Teyla E. - Complete
Guardian by rubycaspar reviews
AU. John promises to be the Guardian of Teyla's baby, in case anything happens to her. When S&R doesn't go quite as planned, he suddenly finds himself with a baby to look after. Can he raise a child? Spoilers for series 4 and 5.
Stargate: Atlantis - Rated: T - English - Family/Angst - Chapters: 16 - Words: 45,478 - Reviews: 269 - Favs: 77 - Follows: 162 - Updated: 2/3/2012 - Published: 7/22/2008 - John S., Torren J. E.
Deliverance by puerta de las estrellas reviews
Based on the episode "Critical Mass." The Goa'uld have infiltrated Atlantis. J/T. Complete.
Stargate: Atlantis - Rated: M - English - Romance/Hurt/Comfort - Chapters: 9 - Words: 36,415 - Reviews: 58 - Favs: 15 - Follows: 10 - Updated: 1/25/2012 - Published: 1/8/2012 - John S., Teyla E. - Complete
Harvest Moon by DevineM27 reviews
Life for Teyla continues on Atlantis as she deals with love, loss, and some surprising changes.
Stargate: Atlantis - Rated: M - English - Romance/Sci-Fi - Chapters: 11 - Words: 20,996 - Reviews: 83 - Favs: 15 - Follows: 28 - Updated: 1/16/2012 - Published: 8/18/2011 - Teyla E., John S.
Endgame by TV Manic 2 reviews
Sheppard and the team step through the gate…and into the middle of a warzone. As Prisoners of War they find themselves trapped not only by their captors, but by the very planet as it falls apart around them… Teamfic, no pairings, set S4
Stargate: Atlantis - Rated: T - English - Adventure/Sci-Fi - Chapters: 8 - Words: 30,103 - Reviews: 52 - Favs: 9 - Follows: 35 - Updated: 1/15/2012 - Published: 12/2/2011 - John S.
Here Be Dragons by T'Pring reviews
Soon after the Nano virus outbreak when tensions between Elizabeth and Major John Sheppard are still thick, Elizabeth finds herself on the mainland with him, helping battle an Ancient experiment come back to menace the Athosian settlement.
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 6 - Words: 30,153 - Reviews: 52 - Favs: 27 - Follows: 9 - Updated: 1/14/2012 - Published: 1/12/2012 - Elizabeth W., John S. - Complete
Invisible wounds by Roo1965 reviews
Set after Common Ground & Phantoms. Sometimes it's the small things that blindside you while you're trying to pretend the big bad nasty things never happened. Sheppard learns that no matter what they've witnessed and done to each each other,they're a team
Stargate: Atlantis - Rated: K - English - Angst/Hurt/Comfort - Chapters: 1 - Words: 6,575 - Reviews: 6 - Favs: 9 - Published: 1/8/2012 - John S. - Complete
Margins of Error, Part 4 of the 'Deliverance' arc by shepsgirl72 reviews
What do you get if you cross an experimental Stargate with a mad Medulsan? Big trouble for Major John Sheppard, that's what.Shep whump a-plenty, plus some action and adventure thrown in for good measure.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 30 - Words: 196,821 - Reviews: 349 - Favs: 20 - Follows: 15 - Updated: 1/7/2012 - Published: 11/28/2011 - John S. - Complete
Numb by scarlet79 reviews
Teyla is captured by the Genii, and Team Sheppard rescues her. But her capture has had lasting effects on her, and her actions in Atlantis could jeopardize the entire expedition. Could be SHEYLA later on. Rated M for references to violence. Now COMPLETE!
Stargate: Atlantis - Rated: M - English - Hurt/Comfort - Chapters: 9 - Words: 18,851 - Reviews: 22 - Favs: 8 - Follows: 2 - Updated: 1/6/2012 - Published: 12/29/2011 - Teyla E., John S. - Complete
There Are Worse Things by puerta de las estrellas reviews
In the last hour, John's world had turned upside down and he was having a hard time letting it all sink in.
Stargate: Atlantis - Rated: M - English - Romance/Angst - Chapters: 1 - Words: 8,777 - Reviews: 9 - Favs: 10 - Follows: 2 - Published: 12/21/2011 - John S., Teyla E. - Complete
There's no such thing as easy by Sailor's Wife reviews
Even though she's in charge of Atlantis, Sam trades places with McKay to go on an 'easy' mission. Drama/adventure/romance/angst/a little ShepWhump, some fluff, a little of everything except slash. Sam/John of course. Ranting increase for epilogue only.
Stargate: Atlantis - Rated: M - English - Romance/Adventure - Chapters: 16 - Words: 43,192 - Reviews: 69 - Favs: 38 - Follows: 26 - Updated: 12/20/2011 - Published: 7/12/2011 - John S., S. Carter/Sam - Complete
The Path Not Taken by JoaniexJony reviews
A man's past helps define who he is, but with his memories gone what will John do? Shep whump, and plenty of angst for his team who are desperate to find him. Set in season 3 after Common Ground, and with my favourite doc Carson still around.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 14 - Words: 51,452 - Reviews: 215 - Favs: 40 - Follows: 19 - Updated: 12/3/2011 - Published: 11/8/2011 - John S. - Complete
The Collective by TV Manic 2 reviews
An explosion rocks Atlantis with Sheppard caught in the middle, but that's only the beginning of his day-off from hell. Something is loose in the city, and it's using the residents to reach its goal: total domination. Shepwhump fest, Sheyla - NOW COMPLETE
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 12 - Words: 62,924 - Reviews: 108 - Favs: 32 - Follows: 31 - Updated: 11/27/2011 - Published: 10/21/2011 - John S. - Complete
To Find the Truth: John's Resolution by IantojJackh reviews
Response to ladygris' New Years resolution challenge. Each chapter is between 300 and 500 words...give or take. Now that Teyla has told John the truth, the road to happiness is never completely easy. JohnxTeyla.
Stargate: Atlantis - Rated: T - English - Friendship/Romance - Chapters: 15 - Words: 9,832 - Reviews: 122 - Favs: 19 - Follows: 37 - Updated: 11/18/2011 - Published: 12/28/2010 - John S., Teyla E.
Forgive and Forget by karasel reviews
John and Teyla escape from a horrendous situation but can they escape from their own guilt and shame? And can they help each other to heal as they build a new life?
Stargate: Atlantis - Rated: M - English - Romance/Angst - Chapters: 40 - Words: 209,247 - Reviews: 258 - Favs: 51 - Follows: 36 - Updated: 11/3/2011 - Published: 9/16/2011 - John S., Teyla E. - Complete
Growth by puerta de las estrellas reviews
John is turning over a new leaf. J/T.
Stargate: Atlantis - Rated: M - English - Romance/Angst - Chapters: 10 - Words: 10,699 - Reviews: 67 - Favs: 15 - Follows: 9 - Updated: 10/30/2011 - Published: 10/17/2011 - John S., Teyla E. - Complete
Pivot by T'Pring reviews
In the aftermath of a mission gone horribly wrong, Teyla discovers that all is not as it seems, leaving her to wrestle with what is real and what is not as Atlantis grieves for one of its own. Please read warnings.
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 5 - Words: 18,907 - Reviews: 43 - Favs: 14 - Follows: 4 - Published: 10/26/2011 - Teyla E. - Complete
Rules Were Made to be Broken by Titan5 reviews
John's dirt biking attempt at burying his guilt backfires . . . or at least goes sideways.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 5,760 - Reviews: 14 - Favs: 12 - Follows: 1 - Published: 10/15/2011 - John S., Rodney M. - Complete
Target by T'Pring reviews
Sheppard's team responds to a request by an ally world and quickly discovers that there's more going on than unusual technology scaring local shopkeepers. When John goes missing, it's up to Sam Carter and the rest to get him home safely. COMPLETE
Stargate: Atlantis - Rated: T - English - Chapters: 10 - Words: 30,175 - Reviews: 105 - Favs: 43 - Follows: 22 - Updated: 10/5/2011 - Published: 9/6/2011 - John S., S. Carter/Sam - Complete
Bystander by anna-garny reviews
When I first noticed Colonel Sheppard hanging around the labs, I thought little of it... *John pursues a lab tech. First-person from her perspective. Rated M for later chapters*
Stargate: Atlantis - Rated: M - English - Humor/Romance - Chapters: 26 - Words: 46,596 - Reviews: 60 - Favs: 28 - Follows: 47 - Updated: 10/4/2011 - Published: 9/17/2010 - John S.
Kallipolis by TV Manic 2 reviews
Sheppard and his team are sent to a legendary Ancient City with the aim of tracking down a ZPM or two, but when they meet the locals, things go to hell: literally. Team-fic with added Shep-whump, No pairings - Now Complete
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 7 - Words: 23,807 - Reviews: 50 - Favs: 25 - Follows: 13 - Updated: 9/30/2011 - Published: 9/23/2011 - John S. - Complete
What is Right by stella-pegasi reviews
Regardless the consequences, sometimes standing for what's right is all that matters.
Stargate: Atlantis - Rated: K+ - English - Drama - Chapters: 1 - Words: 1,753 - Reviews: 7 - Favs: 11 - Published: 9/28/2011 - John S. - Complete
Relic by stella-pegasi reviews
The discovery of an Ancient outpost leads John Sheppard to make a unique discovery of his own.
Stargate: Atlantis - Rated: K - English - Chapters: 1 - Words: 2,336 - Reviews: 5 - Favs: 11 - Follows: 1 - Published: 9/24/2011 - John S. - Complete
The Child of Fear by Frisco reviews
Atlantis must pick up the pieces after returning to Pegasus from an extended absence in the Milky Way. However, reclaiming their place in the Coalition will not be easy. The galaxy has changed, and not every change is visible.
Stargate: Atlantis - Rated: T - English - Friendship/Mystery - Chapters: 1 - Words: 18,202 - Reviews: 6 - Favs: 8 - Follows: 2 - Published: 8/26/2011 - Complete
Post Homecoming Book Tags & Missing Moments by Jade-Max reviews
Stand alone tags or 'missing scenes' between John and Teyla I wanted to see. A few other characters make appearances. All genres - or will be. Rating may change later. Marked as complete, but more Vignettes to come later.
Stargate: Atlantis - Rated: T - English - Friendship/Romance - Chapters: 2 - Words: 8,344 - Reviews: 14 - Favs: 7 - Follows: 4 - Published: 8/17/2011 - John S., Teyla E. - Complete
Hurt by Wedjatqi reviews
Teyla may be with Kanaan, but that doesn't stop people wanting more, thinking about more, and maybe even challenging traditions that others would not entertain. J/T. M Rating. Written for the Beya Summer Break Prompt Battle. COMPLETE
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 9 - Words: 16,627 - Reviews: 90 - Favs: 22 - Follows: 9 - Updated: 8/12/2011 - Published: 8/8/2011 - John S., Teyla E. - Complete
Bounty by stella-pegasi reviews
A bounty has been placed on Sheppard and his team, but by whom? An old enemy or by a new one?
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Adventure - Chapters: 6 - Words: 28,189 - Reviews: 37 - Favs: 17 - Follows: 13 - Updated: 8/7/2011 - Published: 8/2/2011 - John S.
Anchor and Hold by Kristen999 reviews
"Don't worry. I've worked several arson cases in Baltimore. I'll be like Kurt Russell in Backdraft." Taking a step closer toward Tony, eyes wide and panicky, McGee hissed, "Kurt Russell died at the end of that movie." Tony and Gibbs friendship w/Team
NCIS - Rated: T - English - Hurt/Comfort/Drama - Chapters: 1 - Words: 16,867 - Reviews: 52 - Favs: 162 - Follows: 15 - Published: 6/27/2011 - Tony D., Leroy Jethro Gibbs - Complete
The Path Less Traveled by Frisco reviews
After a gate malfunction leaves Teyla and a wounded John on an unknown planet during a natural disaster, Teyla must use all of her skills to keep them alive until they can get home.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Romance - Chapters: 1 - Words: 17,292 - Reviews: 25 - Favs: 48 - Follows: 7 - Published: 6/12/2011 - John S., Teyla E. - Complete
Oneshots 2 by Frisco reviews
This is the second collection of stories - some written for challenges on LiveJournal and others by request or just because. Each chapter is a standalone story. WARNING: Spoilers for all seasons including S5.
Stargate: Atlantis - Rated: T - English - Chapters: 37 - Words: 189,239 - Reviews: 291 - Favs: 45 - Follows: 35 - Updated: 6/12/2011 - Published: 7/18/2008 - Complete
Fragile Attachments by Wedjatqi reviews
Following on from the end scene of the Legacy novel 'The Lost', where we left John and Teyla stood together on a balcony. So be warned - spoilers ahoy for 'The Lost'. JT.
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 1 - Words: 6,222 - Reviews: 11 - Favs: 13 - Follows: 4 - Published: 5/29/2011 - John S., Teyla E. - Complete
Ghosts of the Past by Wedjatqi reviews
John and Teyla both have a stressful day in which events from the past revisit them. Inspired by the S5 episode 'Vegas', and also a sequel to 'All I Want for Christmas…'. JT. Post S5. Complete.
Stargate: Atlantis - Rated: T - English - Romance/Drama - Chapters: 1 - Words: 10,054 - Reviews: 11 - Favs: 15 - Follows: 2 - Published: 5/26/2011 - John S., Teyla E. - Complete
What You Wish For by karasel reviews
Rodney had wished, just once, that he could be taken prisoner by the sexy alien. The rest of the team regret he ever said this when it actually happens to them. Mature themes.
Stargate: Atlantis - Rated: M - English - Drama/Romance - Chapters: 12 - Words: 76,112 - Reviews: 25 - Favs: 40 - Follows: 6 - Updated: 5/14/2011 - Published: 4/29/2011 - John S., Teyla E. - Complete
THE TIES THAT BIND by JoaniexJony reviews
When Sheppard falls ill, the road to recovery takes a different turn than anyone could ever imagine. Sequel to 'REUNION' Shep whump, but I also share the pain with Carson, Rodney and Dave. Hope you enjoy the ride.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 21 - Words: 65,697 - Reviews: 242 - Favs: 31 - Follows: 33 - Updated: 5/11/2011 - Published: 4/12/2011 - John S. - Complete
Body Swap by Wedjatqi reviews
John/Teyla - I think the title says it all. Inspired by the S5 episode 'Identity' and its mind swapping Ancient device. This is also a sequel to my fic 'Infection'. Complete.
Stargate: Atlantis - Rated: M - English - Romance/Humor - Chapters: 1 - Words: 7,715 - Reviews: 16 - Favs: 17 - Follows: 3 - Published: 5/2/2011 - John S., Teyla E. - Complete
Infection by Wedjatqi reviews
Following their return from the crashed Hive ship, it appears that the infection has not been stopped after all. Within a day, Teyla begins to grow sick and she's getting worse. Inspired by the S5 episode 'Infection' JT. COMPLETE!
Stargate: Atlantis - Rated: M - English - Drama/Romance - Chapters: 30 - Words: 151,972 - Reviews: 299 - Favs: 51 - Follows: 26 - Updated: 5/1/2011 - Published: 9/5/2010 - John S., Teyla E. - Complete
Forging On by Lithane reviews
Sequel to Redemption's Resolution. Next Episode in my What Might Have Been season 6. FINAL CHAPTER! The morning after for John's POV. Enjoy!
Stargate: Atlantis - Rated: T - English - Romance/Adventure - Chapters: 18 - Words: 32,112 - Reviews: 117 - Favs: 19 - Follows: 13 - Updated: 4/6/2011 - Published: 2/28/2011 - John S., Larrin - Complete
Taken by Storm by flyboyfan23 reviews
Sheppard has been missing for nearly a week,held prisoner in a remote jungle. It comes to everyone's surprise when he comes stumbling through the stargate with a companion in tow, a very furry companion. shep whump AU in some ways,but the basicsarethesame
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 22 - Words: 35,028 - Reviews: 182 - Favs: 42 - Follows: 66 - Updated: 4/1/2011 - Published: 10/19/2010 - John S., Carson B.
Hope For Them Yet by grtpotential reviews
Is it too late for John and Teyla?
Stargate: Atlantis - Rated: K+ - English - Romance - Chapters: 6 - Words: 6,314 - Reviews: 23 - Favs: 10 - Follows: 4 - Updated: 3/31/2011 - Published: 3/28/2011 - John S., Teyla E. - Complete
Murmurs by stella-pegasi reviews
Two members of the Atlantis Expedition are exhibiting bizarre behavior. When one of them is gravely injured, Atlantis is the only hope for rescue.
Stargate: Atlantis - Rated: K+ - English - Adventure/Hurt/Comfort - Chapters: 5 - Words: 26,362 - Reviews: 54 - Favs: 24 - Follows: 14 - Updated: 3/20/2011 - Published: 3/16/2011 - John S., Rodney M. - Complete
Things That Go Whump in the Night by angstydaydreams reviews
John wakes up in the middle of the night with a tummy ache. Shep Whump ensues...
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 26 - Words: 70,266 - Reviews: 178 - Favs: 86 - Follows: 64 - Updated: 2/27/2011 - Published: 3/26/2010 - John S., Carson B. - Complete
So Near, So Far by ellenoz reviews
Stranded and badly injured, Sheppard struggles to hold on long enough for rescue. *IN PERMANENT HIATUS*
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 7 - Words: 9,015 - Reviews: 49 - Favs: 15 - Follows: 39 - Updated: 2/24/2011 - Published: 1/13/2011 - Rodney M., John S.
Orpheus Rising by everybetty reviews
Rodney and the team work to bring John home, then fight to bring him out of the darkness. Set post S5.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 12,103 - Reviews: 16 - Favs: 27 - Follows: 3 - Published: 2/21/2011 - John S., Rodney M. - Complete
Reprieve by ricochette reviews
John needs Nancy's help with one last mission - and the two eventually realize that everything must come full circle. Post-S5.
Stargate: Atlantis - Rated: T - English - Romance - Chapters: 3 - Words: 14,928 - Reviews: 36 - Favs: 15 - Follows: 38 - Updated: 2/21/2011 - Published: 9/24/2010 - John S., Nancy S.
DAMAGED by JoaniexJony reviews
A test of courage to free a child sets John on an unwilling journey, where he has to find his past not only to escape oppression, but also to survive. Shep whump and team angst, with my favourite doc Carson
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 14 - Words: 48,036 - Reviews: 181 - Favs: 30 - Follows: 27 - Updated: 2/12/2011 - Published: 1/23/2011 - John S. - Complete
The Three Gates by shepsgirl72 reviews
Sheppard and his team find themselves trapped and separated on a planet hiding a secret behind the walls of its great cities – one that has to be revealed to save the subclasses living there from a terrible fate. Shep Whump ahead!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 40 - Words: 217,134 - Reviews: 579 - Favs: 58 - Follows: 48 - Updated: 2/10/2011 - Published: 12/1/2010 - John S. - Complete
What Lies Within by stella-pegasi reviews
An old ally may have stumbled on an important discovery in the Milky Way galaxy and requests John Sheppard's help, but things are never what they seem.
Stargate: Atlantis - Rated: K+ - English - Drama/Hurt/Comfort - Chapters: 4 - Words: 20,415 - Reviews: 32 - Favs: 21 - Follows: 10 - Updated: 1/15/2011 - Published: 1/13/2011 - John S. - Complete
Tin Man by Kristen999 reviews
Visiting an abandoned outpost leads to some amazing discoveries but with dire consequences. Rodney and the team battle a racing clock as they begin to lose Sheppard a little at a time.
Stargate: Atlantis - Rated: K+ - English - Drama/Hurt/Comfort - Chapters: 2 - Words: 31,271 - Reviews: 26 - Favs: 30 - Follows: 2 - Published: 1/9/2011 - Rodney M., John S. - Complete
Emerging by Wedjatqi reviews
Atlantis has returned to Pegasus and all seems well until something new appears in the city, which will possibly forever alter John's view of his future. Written for the 2010 Beya Secret Elf Exchange. JT. COMPLETE.
Stargate: Atlantis - Rated: T - English - Romance/Drama - Chapters: 8 - Words: 26,287 - Reviews: 51 - Favs: 22 - Follows: 13 - Updated: 1/5/2011 - Published: 1/2/2011 - John S., Teyla E. - Complete
Relinquish by Zandra's Ashes reviews
"It's a love story, baby just say yes"- Taylor Swift. What happens when John steps in to escort Elizabeth to Simon's wedding? They are waiting "expectantly" on Earth for the Deadalus to be repaired so they can return to Atlantis.
Stargate: Atlantis - Rated: T - English - Angst/Romance - Chapters: 14 - Words: 38,112 - Reviews: 72 - Favs: 36 - Follows: 41 - Updated: 12/31/2010 - Published: 2/3/2010 - John S., Elizabeth W.
Journey's End, Life's Beginning by ladygris reviews
Some journeys begin innocently, and others begin dramatically. For John and Teyla, they began as mere friends. Now, they end one journey and begin another.
Stargate: Atlantis - Rated: T - English - Romance - Chapters: 3 - Words: 4,148 - Reviews: 29 - Favs: 4 - Follows: 1 - Published: 12/29/2010 - John S., Teyla E. - Complete
Home is Where the Heart Is by Kristen999 reviews
Atlantis is back on Earth; things should be boring, light years away from Pegasus. While trying to find a place in this new life, John struggles with politics, a pending promotion oh, and a deadly conspiracy that threatens the lives of everyone on Earth.
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 6 - Words: 59,314 - Reviews: 32 - Favs: 52 - Follows: 8 - Published: 11/28/2010 - John S. - Complete
REUNION by JoaniexJony reviews
Just before Christmas a tragedy strikes threatening to tear Sheppard's team apart, and rob Atlantis of it's Military CO. Has John's luck finally ran out this time? Sequel to "Sins of the father" with Shep whump, team angst, and my favourite doc, Beckett.
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Angst - Chapters: 10 - Words: 26,463 - Reviews: 131 - Favs: 26 - Follows: 33 - Updated: 11/26/2010 - Published: 11/17/2010 - John S. - Complete
Remember Atlantis by stella-pegasi reviews
Colonel John Sheppard wakes up after suffering a serious injury to find the memories he holds aren't real. Or are they? Now, he has to determine which reality is really his.
Stargate: Atlantis - Rated: K+ - English - Adventure/Hurt/Comfort - Chapters: 12 - Words: 59,979 - Reviews: 64 - Favs: 24 - Follows: 21 - Updated: 11/25/2010 - Published: 9/24/2010 - John S. - Complete
Don't Pay the Ferryman by Astraldust reviews
After the Coalition finds the team not guilty of their crimes against the galaxy, Shiana decides to take matters into her own hands. Shep whump. Now complete.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Sci-Fi - Chapters: 16 - Words: 47,806 - Reviews: 83 - Favs: 21 - Follows: 19 - Updated: 11/8/2010 - Published: 10/14/2010 - John S. - Complete
Making Our Way Home by hifield reviews
Colonel Sheppard and Dr. Keller started their whirlwind romance during a rare downtime on Atlantis. Can the relationship they'd started in Idle Mischief blossom and grow or will unforeseen circumstances tear them apart forever. Evan Lorne, Laura Cadman
Stargate: Atlantis - Rated: T - English - Romance/Adventure - Chapters: 21 - Words: 54,410 - Reviews: 230 - Favs: 31 - Follows: 22 - Updated: 11/7/2010 - Published: 10/18/2010 - John S., Jennifer K. - Complete
Idle Mischief by hifield reviews
Idle hands usually produce mischief, delinquency and oft times misbehavior. Can too much leisure time contribute to romance in the Pegasus?
Stargate: Atlantis - Rated: T - English - Romance - Chapters: 4 - Words: 11,458 - Reviews: 71 - Favs: 31 - Follows: 10 - Updated: 10/23/2010 - Published: 6/2/2010 - John S., Jennifer K. - Complete
Three Embraces by T'Pring reviews
John Sheppard was an island fortress - strong, but distant. He did not invite others to cross the divide, but twice, she had reached for him...
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 1 - Words: 2,343 - Reviews: 25 - Favs: 21 - Follows: 2 - Published: 10/7/2010 - Teyla E., John S. - Complete
The Menace by Scotius reviews
Atlantis is infiltrated by enemy most vile.
Stargate: Atlantis - Rated: T - English - Humor - Chapters: 9 - Words: 12,829 - Reviews: 8 - Favs: 4 - Follows: 5 - Updated: 10/4/2010 - Published: 9/20/2010 - John S., Rodney M. - Complete
Skyward by The Mind Of The Dragon reviews
*COMPLETE* A quick flight to an allied world leaves John and Rodney stranded far from home with little hope of return and time is running out...
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Tragedy - Chapters: 7 - Words: 14,218 - Reviews: 86 - Favs: 42 - Follows: 27 - Updated: 10/2/2010 - Published: 9/15/2010 - Rodney M., John S. - Complete
Black Rose by LMXB reviews
The inhabitants of Atlantis struggle when something mysterious starts to strike down the military personnel. Will Eventually be a John/Jennifer story.
Stargate: Atlantis - Rated: T - English - Drama/Hurt/Comfort - Chapters: 30 - Words: 41,496 - Reviews: 253 - Favs: 42 - Follows: 30 - Updated: 10/1/2010 - Published: 8/20/2010 - John S., Jennifer K. - Complete
Betrayal & Lies by JoaniexJony reviews
After John & Ronon are found after going missing, the team's elation is shattered when it's clear something has gone badly wrong. Question is, can things ever be the same again? Shep whump, Ronon whump/angst and team angst with Carson set in Season 2
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 5 - Words: 16,783 - Reviews: 60 - Favs: 33 - Follows: 24 - Updated: 9/24/2010 - Published: 9/20/2010 - John S., Ronon D. - Complete
Volatile Reactions by Kristen999 reviews
Trapped, pursued, and making it up as they go along. The team fight for their lives during a mission gone horribly wrong. Gen, Action, H/C
Stargate: Atlantis - Rated: K+ - English - Adventure/Drama - Chapters: 1 - Words: 5,788 - Reviews: 9 - Favs: 23 - Follows: 2 - Published: 9/19/2010 - Teyla E., John S. - Complete
Sand and trust by Scotius reviews
Sometimes, when you are saving someones life you can also save your own soul.
Stargate: Atlantis - Rated: K+ - English - Angst - Chapters: 1 - Words: 2,399 - Reviews: 4 - Favs: 9 - Follows: 4 - Published: 9/15/2010 - Ronon D., John S.
Two Paths One Destiny by sagey reviews
Companion fic for There Is Only Now.. Teyla's thoughts during EATG. John/Teyla fanfic
Stargate: Atlantis - Rated: K - English - Romance - Chapters: 1 - Words: 1,960 - Reviews: 7 - Favs: 4 - Follows: 1 - Published: 9/5/2010 - John S., Teyla E. - Complete
There Is Only Now by sagey reviews
Set during EATG. Johns thoughts as he goes to his doom. A John/Teyla fanfic
Stargate: Atlantis - Rated: K - English - Romance - Chapters: 1 - Words: 1,340 - Reviews: 13 - Favs: 5 - Follows: 1 - Published: 8/29/2010 - John S., Teyla E. - Complete
Sins Of The Father by JoaniexJony reviews
A request for assistance turns out to be a trap for Sheppard and McKay. John knows why Rodney was taken, but why him? Shep whump! a little for Rodney too, set after 'Conversion' in season 2. The is a John/Rodney centric fic, but no slash.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 11 - Words: 32,785 - Reviews: 99 - Favs: 38 - Follows: 31 - Updated: 8/26/2010 - Published: 8/15/2010 - John S., Rodney M. - Complete
The Warmth of Home by Wedjatqi reviews
Teyla returns from a difficult mission. JT. Inspired by the episode 'Brain Storm'.
Stargate: Atlantis - Rated: K+ - English - Romance/Drama - Chapters: 1 - Words: 1,745 - Reviews: 15 - Favs: 16 - Follows: 2 - Published: 8/22/2010 - John S., Teyla E. - Complete
Snacks by moms2398 reviews
Series of episode tags that involve Atlantis' Food Services Chief. Rating is only as high because characters sometimes have a slip of the tongue.Mostly GEN, it does slip into HET at the end. Re-edited 7/2011. *NOMINATED FOR 2011 GATEFIC AWARD* VOTE NOW!
Stargate: Atlantis - Rated: T - English - Humor - Chapters: 110 - Words: 122,074 - Reviews: 482 - Favs: 90 - Follows: 60 - Updated: 8/14/2010 - Published: 7/6/2007 - John S. - Complete
Opportunity by Wedjatqi reviews
An opportunity arrives for certain people in Atlantis during one innocent lunchtime in the Mess Hall. JT. Inspired by the episode 'Remnants'. Set post season 5.
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 4 - Words: 19,585 - Reviews: 38 - Favs: 19 - Follows: 7 - Updated: 8/14/2010 - Published: 8/11/2010 - John S., Teyla E. - Complete
Sensual by Wedjatqi reviews
Teyla discovers what its like to have a vacation on Earth, and it results in some new changes to her life. JT. Inspired by S5 episode First Contacts.
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 5 - Words: 30,718 - Reviews: 40 - Favs: 40 - Follows: 9 - Updated: 7/15/2010 - Published: 7/13/2010 - John S., Teyla E. - Complete
Hero Defined by stella-pegasi reviews
Sheppard takes a restless Colonel Caldwell on an easy diplomatic mission off-world. However, the easy mission becomes a matter of life and death as the two colonels are kidnapped and Sheppard is gravely injured.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Adventure - Chapters: 1 - Words: 19,902 - Reviews: 30 - Favs: 60 - Follows: 4 - Published: 7/13/2010 - John S., Steven C. - Complete
COLLABORATIONS by JoaniexJony reviews
If Shep didn't have bad luck, he would have no luck at all. Atlantis had developed a defence against the Wraith. Just a pity it couldn't help John when he got a visit from Kolya's brother. Sequel to 'Retribution' Shep whump, Ronon too with all the team.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Adventure - Chapters: 13 - Words: 37,319 - Reviews: 81 - Favs: 18 - Follows: 17 - Updated: 7/13/2010 - Published: 6/27/2010 - John S. - Complete
Five Things: Stargate by somehowunbroken reviews
Yes, it's the "five things" meme. I've a few written and a ton more to tackle, so hopefully they'll find their way here. It's probably going to be John-centric because I love me some John. Also, I may cheat and put in some SG1; skip 'em if you hate 'em.
Stargate: Atlantis - Rated: K+ - English - Chapters: 2 - Words: 2,917 - Reviews: 4 - Favs: 7 - Follows: 7 - Published: 7/11/2010
Silence by Wagthedog reviews
A trade deal goes wrong and there are consequences for the Atlanteans. Everyone gets whumped, but mostly Sheppard. COMPLETE!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 6 - Words: 9,857 - Reviews: 45 - Favs: 31 - Follows: 26 - Updated: 7/2/2010 - Published: 6/6/2010 - Carson B., John S. - Complete
Always Hope by stella-pegasi reviews
Another routine mission to open up relations with new worlds in Pegasus goes awry. SGA-1 discovers their friendly new allies are hiding a dark secret that could cost them their lives.
Stargate: Atlantis - Rated: K+ - English - Adventure/Hurt/Comfort - Chapters: 8 - Words: 29,937 - Reviews: 15 - Favs: 18 - Follows: 4 - Updated: 6/19/2010 - Published: 6/14/2010 - John S., Rodney M. - Complete
Chasing Away the Monsters by Wedjatqi reviews
John and Teyla enjoy a camping trip alone together. JT. Inspired by the episode Whispers.
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 1 - Words: 11,014 - Reviews: 18 - Favs: 15 - Follows: 2 - Published: 6/15/2010 - John S., Teyla E. - Complete
Repairing the Past, Building a Future by daisyscrapper reviews
Sheppard protects Keller from a group attempting to kidnap her, both discovering growing feelings of attraction. He also works on his relationship with his brother Dave. Set on Earth. Pairings all pre-ship : Jen/John, Carolyn Lam/Mitchell, Dave/OC
Stargate: Atlantis - Rated: K - English - Romance/Suspense - Chapters: 14 - Words: 40,870 - Reviews: 133 - Favs: 54 - Follows: 34 - Updated: 6/8/2010 - Published: 5/21/2010 - Jennifer K., John S. - Complete
Long Denials by Wedjatqi reviews
Parted from Kanaan and single again, Teyla contemplates her life and her friendship with John. Inspired by the episode Broken Ties, and could be seen as a companion piece to the fic 'The Pain of Waiting'. JT
Stargate: Atlantis - Rated: T - English - Romance/Drama - Chapters: 1 - Words: 2,723 - Reviews: 15 - Favs: 13 - Follows: 2 - Published: 6/6/2010 - John S., Teyla E. - Complete
A Beautiful Day by Wedjatqi reviews
A bright beautiful day on Atlantis and everyone is out enjoying the sunshine, which allows things to heat up a little between John and Teyla.
Stargate: Atlantis - Rated: T - English - Romance/Drama - Chapters: 1 - Words: 6,562 - Reviews: 21 - Favs: 9 - Published: 5/31/2010 - John S., Teyla E. - Complete
Own Little World by casus17 reviews
Sheppard wakes up in a world without Atlantis... and he doesn't even know it. All he knows is something's wrong, and he'll do anything to make it right. But how can he fight when he doesn't even know what he's fighting for?
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 13 - Words: 45,353 - Reviews: 71 - Favs: 23 - Follows: 24 - Updated: 5/27/2010 - Published: 5/13/2010 - John S. - Complete
Mother, Wife, and Warrior by Wedjatqi reviews
Teyla reflects on her life one evening - on her work, her children, and being married to John Sheppard. A sequel to 'Lost'. Complete.
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 1 - Words: 18,761 - Reviews: 23 - Favs: 23 - Follows: 1 - Published: 5/26/2010 - John S., Teyla E. - Complete
Falcons Fly by stella-pegasi reviews
John Sheppard is graduating from high school, and his future is bright. The question, however, is which future will he have; the one he wants, or the one his father wants for him.
Stargate: Atlantis - Rated: K - English - Angst - Chapters: 1 - Words: 6,836 - Reviews: 6 - Favs: 12 - Published: 5/18/2010 - John S. - Complete
Retribution by JoaniexJony reviews
Who knew Kolya had a brother? Certainly not John Sheppard, and that was only the start of his problems as Kolya Jnr wanted payback for the death of his brother. Shep whump and team angst set sometime after Season 5.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 12 - Words: 33,867 - Reviews: 86 - Favs: 28 - Follows: 19 - Updated: 5/9/2010 - Published: 4/25/2010 - John S. - Complete
Second Life by Eildon Rhymer reviews
When the unthinkable happens, Sheppard is given the chance to erase the past and start again. And that should be the end of it. Shouldn't it?
Stargate: Atlantis - Rated: K+ - English - Angst/Hurt/Comfort - Chapters: 3 - Words: 17,899 - Reviews: 19 - Favs: 23 - Published: 5/6/2010 - John S. - Complete
Into the Rain by stella-pegasi reviews
Sheppard and Woolsey attend a Pegasus Coalition Council Meeting, but a contentious meeting is the least of their troubles, someone wants them dead.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Adventure - Chapters: 5 - Words: 20,974 - Reviews: 15 - Favs: 19 - Follows: 3 - Updated: 5/5/2010 - Published: 5/4/2010 - John S., R. Woolsey - Complete
End of the Search by sakurablue13 reviews
a short drabble of John’s musing
Stargate: Atlantis - Rated: K+ - English - Romance - Chapters: 1 - Words: 732 - Reviews: 2 - Favs: 3 - Follows: 1 - Published: 5/3/2010 - John S., Torren J. E. - Complete
SGA: When He Remembers by Syl reviews
The harder John tries to forget her, the more he remembers how much he loved her.
Stargate: Atlantis - Rated: K+ - English - Romance/Angst - Chapters: 1 - Words: 935 - Reviews: 8 - Favs: 10 - Published: 5/2/2010 - John S., Nancy S. - Complete
Dumb Luck by kwillads reviews
If it wasn't for Dumb Luck, John wouldn't have any luck at all. Includes David Sheppard. Set after season 5. Spoilers possible. Some bad language. Story was beta'd, all remaining errors are my doing. Special thanks to ValleyA for sparking my muse.
Stargate: Atlantis - Rated: T - English - Chapters: 3 - Words: 72,618 - Reviews: 41 - Favs: 27 - Follows: 13 - Updated: 4/30/2010 - Published: 4/25/2010 - John S. - Complete
The Bridge by Kariesue reviews
David and John Sheppard meet for lunch while in San Francisco.
Stargate: Atlantis - Rated: K+ - English - Family - Chapters: 1 - Words: 15,270 - Reviews: 50 - Favs: 191 - Follows: 16 - Published: 4/28/2010 - John S., David S./Sheppard - Complete
Major's Day Out by T'Pring reviews
When Sheppard takes Maj Teldy, Lorne and Vega to explore a frozen wraith outpost, Anne is eager to prove herself. When the mission goes sideways and Sheppard is injured, Anne gets a whole new perspective on trust and what it takes to survive in Pegasus.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 7 - Words: 29,976 - Reviews: 107 - Favs: 73 - Follows: 21 - Updated: 4/23/2010 - Published: 4/17/2010 - A. Teldy, John S. - Complete
Games without frontiers by Roo1965 reviews
SGA H/C Challenges LJ Easter-fic 2010 for Kriadydragon. series 3, after Common Ground, efore Phantoms & The Return. Sheppard’s lost and then found, but not happy to be back in Atlantis- why is that? Just because he’s paranoid....
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 11,658 - Reviews: 5 - Favs: 12 - Follows: 2 - Published: 4/21/2010 - John S. - Complete
Atonement, Part 3 of the Deliverance Trilogy by shepsgirl72 reviews
Sheppard and team find themselves stranded on a planet at the outskirts of the galaxy with an energy anomaly, a gate that refuses to dial out, and a Medulsan who means to have her pound of flesh. Third story in Deliverance Trilogy. Shep Whump!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 30 - Words: 145,481 - Reviews: 285 - Favs: 31 - Follows: 28 - Updated: 4/20/2010 - Published: 3/22/2010 - John S. - Complete
Reflections in Water by stella-pegasi reviews
Upon the anniversary of a tragic loss, Sheppard’s in pain and his team is distraught at not being able to help him.
Stargate: Atlantis - Rated: K+ - English - Angst/Hurt/Comfort - Chapters: 6 - Words: 18,024 - Reviews: 12 - Favs: 18 - Published: 4/11/2010 - John S., Rodney M. - Complete
The Weight Of An Oath by JoaniexJony reviews
Leave no man behind" was John's Oath, but how far would he go to rescue a friend? Serious Shep whump, some whump for Ronon too with team and Carson angst and friendship. Now complete
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 10 - Words: 28,576 - Reviews: 106 - Favs: 37 - Follows: 21 - Updated: 3/26/2010 - Published: 3/16/2010 - John S., Ronon D. - Complete
Goodnight Kiss by tielan reviews
Even children in the Pegasus galaxy try to put off their bedtime. John/Teyla
Stargate: Atlantis - Rated: T - English - Humor/Romance - Chapters: 1 - Words: 1,099 - Reviews: 14 - Favs: 11 - Follows: 2 - Published: 3/24/2010 - Teyla E., John S. - Complete
My Time of Dying by angstydaydreams reviews
John and Elizabeth are trapped in a cave-in after an earthquake. Their team tries to save them before it's too late. Gratuitous Shep Whump.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 5 - Words: 13,877 - Reviews: 26 - Favs: 44 - Follows: 14 - Updated: 3/22/2010 - Published: 3/18/2010 - John S., Elizabeth W. - Complete
Wild Blue Yonder by stella-pegasi reviews
A mother’s love paves the path for her son’s future.
Stargate: Atlantis - Rated: K - English - Chapters: 1 - Words: 2,858 - Reviews: 7 - Favs: 11 - Published: 3/19/2010 - John S. - Complete
Another Man's Shoes by everybetty reviews
What makes a man? John and Carson each struggle with the question...only John’s life hangs in the balance.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 22,008 - Reviews: 13 - Favs: 26 - Published: 3/16/2010 - John S., Carson B. - Complete
In The Silence by Ani-maniac494 reviews
A mission gone horribly wrong leaves Sheppard overwhelmed with guilt. Teyla/Sheppard friendship. One-shot.
Stargate: Atlantis - Rated: T - English - Angst/Friendship - Chapters: 1 - Words: 616 - Reviews: 6 - Favs: 5 - Published: 3/13/2010 - Teyla E., John S. - Complete
Dark River by stella-pegasi reviews
A natural disaster puts the team at risk and they have to save themselves.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 1 - Words: 4,288 - Reviews: 6 - Favs: 15 - Published: 3/12/2010 - John S., Rodney M. - Complete
Illeura by JT-VS6 reviews
Sheppard has a dream & leads the team to an Ancient lab within Atlantis' unused section. It holds many secrets- one of which endangers Teyla's life. And Keller learns of her fate as CMO, in the thrilling conclusion to the Medical Board Review.
Stargate: Atlantis - Rated: K - English - Chapters: 1 - Words: 10,161 - Reviews: 3 - Favs: 7 - Follows: 2 - Published: 3/9/2010 - John S., Teyla E. - Complete
Friend or Foe by Titan5 reviews
This was posted some time ago on LJ, but thought I'd bring it over. John needs to be rescued, but it comes from a very unlikely source.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 1 - Words: 6,104 - Reviews: 18 - Favs: 61 - Follows: 6 - Published: 2/27/2010 - John S., Todd - Complete
Astonishing Persistence Of Memory: Present Tense by tielan reviews
After being missing for six months, John returns to Atlantis. But in his absence, many things have changed and he'll have to fight for his right to belong - in the city, among his friends. Updated 22nd Feb.
Stargate: Atlantis - Rated: M - English - Adventure/Drama - Chapters: 11 - Words: 62,878 - Reviews: 76 - Favs: 14 - Follows: 10 - Updated: 2/26/2010 - Published: 12/17/2009 - John S. - Complete
The Cost of Justice by stella-pegasi reviews
Shakespeare wrote, "Though justice be thy plea, consider this, That, in the course of justice, none of us Should see salvation." On this day, John Sheppard learned that justice without mercy had dire consequences.
Stargate: Atlantis - Rated: K+ - English - Angst - Chapters: 1 - Words: 2,623 - Reviews: 9 - Favs: 14 - Published: 2/22/2010 - John S. - Complete
The Way In Which These Things Change by Gater101 reviews
AU. It's a marvel, the way some things change and the way some things stay exactly the same.
Stargate: Atlantis - Rated: K+ - English - Angst/Romance - Chapters: 1 - Words: 1,913 - Reviews: 11 - Favs: 7 - Published: 2/17/2010 - John S., Teyla E. - Complete
Declaration of Love by Wedjatqi reviews
No spoilers... Valentine's Day 2010 response, JT
Stargate: Atlantis - Rated: K+ - English - Romance/Drama - Chapters: 2 - Words: 5,806 - Reviews: 30 - Favs: 10 - Follows: 6 - Updated: 2/15/2010 - Published: 2/14/2010 - John S., Teyla E. - Complete
Innocent Evenings by Wedjatqi reviews
Teyla enjoys a night in. Valentine's Day 2010 challenge response. JT.
Stargate: Atlantis - Rated: T - English - Romance - Chapters: 1 - Words: 2,972 - Reviews: 21 - Favs: 16 - Published: 2/14/2010 - John S., Teyla E. - Complete
First Contacts by Wedjatqi reviews
ALLIANCE FIC - John makes an unexpected and uncomfortable first contact with those from the Wraith-free Alliance territory, in the form of an petite beautiful warrior named Emmagan. JT. AU. COMPLETE.
Stargate: Atlantis - Rated: T - English - Romance/Sci-Fi - Chapters: 16 - Words: 69,577 - Reviews: 118 - Favs: 56 - Follows: 23 - Updated: 2/11/2010 - Published: 6/8/2009 - John S., Teyla E. - Complete
Maybe We're Better Off This Way by espergirl04 reviews
There are some things they don't say, but that doesn't mean that someone else won't. John/Teyla.
Stargate: Atlantis - Rated: K+ - English - Chapters: 1 - Words: 638 - Reviews: 12 - Favs: 7 - Published: 2/3/2010 - John S., Teyla E. - Complete
Forced Leave: The Honeymoons by PrincessPatrice reviews
This is the 3rd and last story in my Forced Leave series. After their weddings, John and Teyla go on thier Honeymoon to Hawaii. Dave and Amanda, Jack and Sam join them. Fun and Romance follow.
Stargate: Atlantis - Rated: T - English - Romance/Family - Chapters: 15 - Words: 35,758 - Reviews: 48 - Favs: 29 - Follows: 10 - Updated: 2/3/2010 - Published: 1/16/2010 - John S., Teyla E. - Complete
The CO by stella-pegasi reviews
Atlantis mounts a mission to stop raiders on the planet Glostern and two young corporals are put to the test when one of the Atlantis team is wounded.
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 8 - Words: 33,531 - Reviews: 25 - Favs: 27 - Follows: 11 - Updated: 2/2/2010 - Published: 1/31/2010 - John S., Rodney M. - Complete
Enslaved by JoaniexJony reviews
John is captured by a woman who wants him as her consort but when Shep refuses he's made her slave. Question is can rescue come before their friend is broken beyond repair? Serious Shep whump and team angst Set in Season 3 with Elizabeth and Carson.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 7 - Words: 15,721 - Reviews: 63 - Favs: 25 - Follows: 20 - Updated: 1/20/2010 - Published: 1/10/2010 - John S., Elizabeth W. - Complete
Avoiding relationships by daisyscrapper reviews
Col. Sheppard and Dr. Keller both have something in common- avoiding relationships. They come up with a plan to discourage others from bothering them... until they both begin to enjoy their time together too much.
Stargate: Atlantis - Rated: K+ - English - Romance/Adventure - Chapters: 7 - Words: 18,192 - Reviews: 35 - Favs: 31 - Follows: 9 - Updated: 1/12/2010 - Published: 1/8/2010 - John S., Jennifer K. - Complete
Skipping the Angles by T'Pring reviews
Sheppard and Team land on a violent planet and find themselves caught up in the local Clan's battle for leadership. John is injured, friends are not what they seem, and the jumper won't be back for twelve more hours. Cue action, knives, and thugs.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 6 - Words: 31,461 - Reviews: 67 - Favs: 37 - Follows: 4 - Updated: 1/12/2010 - Published: 1/11/2010 - John S. - Complete
A Cold Winter's Night by MrsB108 reviews
J/T John and Teyla share a winter's night pondering life while visiting a newfound planet
Stargate: Atlantis - Rated: K+ - English - Chapters: 1 - Words: 1,894 - Reviews: 5 - Favs: 1 - Published: 1/10/2010 - John S., Teyla E. - Complete
All I Want For Christmas by Wedjatqi reviews
A familiar face has returned to Atlantis and the arrival sparks off some interesting consequences for John and Teyla. JT.
Stargate: Atlantis - Rated: M - English - Romance/Humor - Chapters: 13 - Words: 69,667 - Reviews: 153 - Favs: 61 - Follows: 29 - Updated: 1/9/2010 - Published: 12/4/2009 - John S., Teyla E. - Complete
Just Another Day for John & Lexi, Part 1 by J loves JS reviews
Just another day in the lives of John Sheppard and Lexi Carter. Takes place in Season 5.
Stargate: Atlantis - Rated: M - English - Hurt/Comfort/Romance - Chapters: 41 - Words: 96,435 - Reviews: 50 - Favs: 15 - Follows: 7 - Updated: 1/9/2010 - Published: 11/1/2009 - John S. - Complete
End Game by Kristen999 reviews
John is forced to fight for his life and the lives of his teammates. His opponent may be the most formidable he has ever faced... oh, and there’s also deadly radiation, freezing temps and hypoxia.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 1 - Words: 20,711 - Reviews: 20 - Favs: 53 - Follows: 3 - Published: 1/6/2010 - John S. - Complete
52 Weeks by Cassie Valentine reviews
A lot can happen in 52 weeks. . .
Stargate: Atlantis - Rated: K+ - English - Romance - Chapters: 1 - Words: 3,990 - Reviews: 5 - Favs: 5 - Published: 1/5/2010 - Elizabeth W., John S. - Complete
Fatal Wound by Cielito reviews
Set after Enemy at the Gate: Summ: John Sheppard was an insistent man. She knew that already, but she thought he'd be out this evening with someone; not here, not with her. John & Teyla
Stargate: Atlantis - Rated: M - English - Drama/Romance - Chapters: 1 - Words: 7,852 - Reviews: 10 - Favs: 8 - Follows: 1 - Published: 1/5/2010 - Teyla E., John S. - Complete
New Storm by Wedjatqi reviews
Post S5, Atlantis is on Earth. Something dangerous is discovered in Atlantis, the consequences of which will forever change the team's lives. JT. Written for the Beya Secret Elf challenge. COMPLETE.
Stargate: Atlantis - Rated: T - English - Drama/Romance - Chapters: 8 - Words: 43,212 - Reviews: 47 - Favs: 21 - Follows: 5 - Published: 12/31/2009 - John S., Teyla E. - Complete
Semper Tuus Ero by Gater101 reviews
Five Christmas Eve's of Atlantis we never got to experience.
Stargate: Atlantis - Rated: K+ - English - Romance - Chapters: 1 - Words: 779 - Reviews: 5 - Favs: 6 - Published: 12/25/2009 - John S., Teyla E. - Complete
Puddle Jumper Down by ltcoljsheppard reviews
John Sheppard’s puddle jumper crashes on an alien planet with one passenger on board - Colonel Steven Caldwell. The two men have to depend on one another if they’re going to survive.
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 14 - Words: 100,678 - Reviews: 122 - Favs: 73 - Follows: 51 - Updated: 12/19/2009 - Published: 12/20/2008 - John S. - Complete
Goodbye, Sun by stella-pegasi reviews
A quick trip off-world by jumper goes horribly wrong. Will they find the jumper in time? John S. / Team K Complete
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 1,282 - Reviews: 5 - Favs: 13 - Published: 12/11/2009 - John S. - Complete
Repression, Part 2 of the Deliverance Trilogy by shepsgirl72 reviews
Sheppard has to face an old adversary when a 'Thank You' celebration on Medulsa doesn't turn out quite as planned. But is it really only his skill with Ancient tech she wants, or are her needs more...personal? Sequel to Deliverance. Contains Shep Whump!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 30 - Words: 118,433 - Reviews: 238 - Favs: 32 - Follows: 28 - Updated: 12/4/2009 - Published: 10/27/2009 - John S. - Complete
Betrayed by JoaniexJony reviews
This is my first fanfic so please let me know what you think as I am new to writing and would appreciate con crit. Summary:- What if "leave no man behind" doesnt refer to you? John S whump and angst as the situation he fears most becomes a reality.
Stargate: Atlantis - Rated: T - English - Chapters: 9 - Words: 15,188 - Reviews: 46 - Favs: 18 - Follows: 11 - Updated: 11/30/2009 - Published: 11/21/2009 - John S., Carson B. - Complete
The Violet Hour by Gater101 reviews
Teyla likes the supernatural. Halloween fic.
Stargate: Atlantis - Rated: M - English - Romance - Chapters: 1 - Words: 3,441 - Reviews: 7 - Favs: 9 - Follows: 2 - Published: 10/31/2009 - Teyla E., John S. - Complete
The Colonel & Doctor Carter by J loves JS reviews
Lexi Carter is Samantha Carter's niece. After the death of Dr. Heightmeyer, Sam brings Lexi to Atlantis to be the new psychiatrist. After meeting Colonel Sheppard, a relationship that shouldn't happen does. Takes place during season 4.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Romance - Chapters: 24 - Words: 85,239 - Reviews: 30 - Favs: 21 - Follows: 10 - Updated: 10/23/2009 - Published: 10/22/2009 - John S. - Complete
Unbreakable Bonds by SGAFan reviews
When Sheppard's team violates local custom, they find themselves in a fight for survival that teaches them all a little bit more the meaning of team, and just how far each of them will go to defend the others. Warning: Shep Whump/HC. K mild profanity.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 3 - Words: 24,433 - Reviews: 24 - Favs: 44 - Follows: 1 - Published: 10/5/2009 - John S. - Complete
Two Princes by Wedjatqi reviews
Trapped in Pegasus with no way to get back home, John is faced with the prospect of spending the rest of his life there and has to come to terms with living among the Athosians, but one of them is not happy about him being there. JT, Post S5 COMPLETE
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 14 - Words: 85,434 - Reviews: 150 - Favs: 73 - Follows: 28 - Updated: 9/20/2009 - Published: 9/12/2009 - John S., Teyla E. - Complete
Hypothesis by kwillads reviews
Comfort comes from an unexpected source when John is unknowingly hurt in a trip and fall accident. Spoilers: Season's 1-5, Rated T for mild language, Chapter 2 has a warning. Story complete, but will be posted in 2 parts.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 2 - Words: 37,041 - Reviews: 86 - Favs: 170 - Follows: 20 - Updated: 9/18/2009 - Published: 9/16/2009 - John S., Steven C. - Complete
The Enabled by Gater101 reviews
John leaves Atlantis on an undercover mission to help rid the galaxy of the Wraith. But what will become of him and the power he holds? Will Atlantis be able to survive without their strongest link?
Stargate: Atlantis - Rated: T - English - Mystery/Drama - Chapters: 5 - Words: 15,520 - Reviews: 41 - Favs: 16 - Follows: 27 - Updated: 9/11/2009 - Published: 7/21/2009 - John S., Teyla E.
A Time to Heal by PyroDragon2006 reviews
John thought it was over, but when a new presidential advisor and an old enemy both show up on Atlantis, the wounds run deep. Set after Common Ground, so SPOILERS! Now COMPLETE!
Stargate: Atlantis - Rated: T - English - Drama/Adventure - Chapters: 18 - Words: 53,959 - Reviews: 380 - Favs: 144 - Follows: 126 - Updated: 8/30/2009 - Published: 12/14/2006 - John S., Rodney M. - Complete
Before A Fall by Ani-maniac494 reviews
Patrick Sheppard had never put much stock in the old adage about pride being the deadliest of all sins. Outcast tag.
Stargate: Atlantis - Rated: K+ - English - Angst/Family - Chapters: 1 - Words: 2,901 - Reviews: 18 - Favs: 47 - Follows: 4 - Published: 8/21/2009 - John S. - Complete
Guarding the Shepard by Kidwrangler reviews
Sheppard investigates a series of seemingly unrelated accidents in Atlantis.
Stargate: Atlantis - Rated: T - English - Adventure/Humor - Chapters: 15 - Words: 46,819 - Reviews: 304 - Favs: 115 - Follows: 181 - Updated: 7/28/2009 - Published: 2/16/2006
The Questioning Way by Wedjatqi reviews
After the events of Prodigal Teyla has to address questions and issues that she has long ignored, but she does not have to face them alone. JT.
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 12 - Words: 71,738 - Reviews: 154 - Favs: 63 - Follows: 56 - Updated: 7/26/2009 - Published: 11/15/2008 - John S., Teyla E. - Complete
Mending Fences by Astraldust reviews
John can’t even go on a simple road trip without finding trouble. However it brings him closer to his brother. Shep Whump. COMPLETE
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 13 - Words: 33,414 - Reviews: 140 - Favs: 97 - Follows: 58 - Updated: 6/21/2009 - Published: 5/30/2009 - John S. - Complete
Evander's Heir II: Dark Mind by ShepsReyna reviews
The continuation of Sheppard story and why his gene is strongest. He develops his abilities further and struggles to contain them. Shepcentric with shep whump, O'Neill makes a return because I love him too. Some profanity/violence.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 18 - Words: 95,374 - Reviews: 223 - Favs: 114 - Follows: 76 - Updated: 6/14/2009 - Published: 9/14/2008 - John S. - Complete
Hidden Depths by shepsgirl72 reviews
Inspired by the latest Sheppard h c challenge over on LJ, but posted here instead. Theme: Lies/deceit/or betrayal. Sheppard has to deal with the fact his life might be permanently changed after sustaining an injury off-world. One Shot
Stargate: Atlantis - Rated: K - English - Hurt/Comfort - Chapters: 1 - Words: 5,933 - Reviews: 13 - Favs: 19 - Follows: 1 - Published: 6/12/2009 - John S. - Complete
Darkest Before the Dawn by Frisco reviews
Some things have to be accepted; others have to be fought with everything you've got. A tragic off-world mission rocks Atlantis and shatters John. Struggling to pull the pieces together, he discovers he has one chance to set everything right.
Stargate: Atlantis - Rated: T - English - Angst/Friendship - Chapters: 1 - Words: 11,077 - Reviews: 20 - Favs: 20 - Follows: 1 - Published: 6/4/2009 - John S. - Complete
Deliverance, Part 1 of the Deliverance Trilogy by shepsgirl72 reviews
When Sheppard takes on the plight of the downtrodden men of Medulsa, he gets more trouble than he bargained for. Shep whump prevails! Set late Season 1 so spoilers for any episodes up to and including 'Sanctuary'. Complete - updates every couple of days.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Adventure - Chapters: 15 - Words: 51,854 - Reviews: 116 - Favs: 39 - Follows: 18 - Updated: 6/2/2009 - Published: 5/18/2009 - John S. - Complete
It's In Our Hearts by Gater101 reviews
They may not have much but when he kissed her like that it was enough. AU - tag fic with Wedjatqi
Stargate: Atlantis - Rated: M - English - Romance - Chapters: 1 - Words: 2,855 - Reviews: 8 - Favs: 11 - Published: 5/28/2009 - Teyla E., John S. - Complete
Remember the Fallen by SGAFan reviews
It's a simple ceremony that carries deep meaning for John Sheppard. Some years, it's harder than others.
Stargate: Atlantis - Rated: K - English - Drama - Chapters: 1 - Words: 1,484 - Reviews: 25 - Favs: 16 - Published: 5/24/2009 - John S. - Complete
The Final Days by Wedjatqi reviews
Atlantis’ return to Earth sparks off the continuation of an ancient battle that requires the skills of those from Atlantis, but it will lead to the most painful of consequences for one member of the team. Post Enemy at the Gate.
Stargate: Atlantis - Rated: M - English - Drama/Romance - Chapters: 9 - Words: 51,095 - Reviews: 60 - Favs: 25 - Follows: 28 - Updated: 5/23/2009 - Published: 4/15/2009 - Teyla E., John S.
Forced Leave by PrincessPatrice reviews
John is injured and is being forced to go back to earth for his recovery. He is accompanied by his team. Shep whump. Mentions of toture some Sheyla
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 28 - Words: 72,740 - Reviews: 149 - Favs: 84 - Follows: 34 - Updated: 4/26/2009 - Published: 3/31/2009 - John S. - Complete
Lost by Wedjatqi reviews
John and Teyla are thought dead following a major accident, but in truth they are trapped on a dangerous alien world, with no hope of rescue and with only the clothes on their backs and each other to keep them alive. JT. NOW COMPLETE!
Stargate: Atlantis - Rated: M - English - Drama/Romance - Chapters: 64 - Words: 153,132 - Reviews: 468 - Favs: 85 - Follows: 40 - Updated: 4/13/2009 - Published: 12/27/2008 - John S., Teyla E. - Complete
To Face What Comes by Frisco reviews
When a prison sentence and an experiment rip John's memories from him, his team must help him find himself again. Spoilers through The Prodigal. Contains scenes of violence.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 17,013 - Reviews: 23 - Favs: 38 - Follows: 1 - Published: 3/25/2009 - John S. - Complete
The Softer Side by Gater101 reviews
OneShot. She hoped his nostalgia lasted long into the night.
Stargate: Atlantis - Rated: K+ - English - Romance - Chapters: 1 - Words: 1,713 - Reviews: 8 - Favs: 10 - Published: 3/12/2009 - Teyla E., John S. - Complete
Always, All Ways by Gater101 reviews
One Shot. She’s quieter than last time but the silence fills the gaps between the panted breaths better than any words between them ever could.
Stargate: Atlantis - Rated: M - English - Romance - Chapters: 1 - Words: 1,184 - Reviews: 6 - Favs: 5 - Follows: 1 - Published: 3/10/2009 - John S., Teyla E. - Complete
Autumn in our Hearts by SGAFan reviews
Learning of a planet that may provide a wealth of advanced technology, Elizabeth sends Sheppard’s team to investigate. What they find threatens not only their lives and Atlantis’s existence but makes them question their own beliefs and actions. Early S2.
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 4 - Words: 76,978 - Reviews: 29 - Favs: 16 - Follows: 4 - Published: 3/8/2009 - Elizabeth W., John S. - Complete
As Far as it Takes by Eildon Rhymer reviews
How far would you go, Colonel Sheppard?" asked the tall man. "How far will you go to save him?"
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 5 - Words: 18,207 - Reviews: 91 - Favs: 58 - Follows: 20 - Updated: 3/5/2009 - Published: 3/1/2009 - John S., Rodney M. - Complete
Cold Silence by SGAFan reviews
It's a brisk sunny day in the snow. What could possibly happen? *Warning:* There be Shep Whump here! Rated K for now.
Stargate: Atlantis - Rated: K - English - Drama - Chapters: 7 - Words: 22,812 - Reviews: 137 - Favs: 58 - Follows: 44 - Updated: 2/15/2009 - Published: 12/28/2008 - John S. - Complete
One Safe Place by Gater101 reviews
It hadn't hit him yet but it wasn't far off. 'Sunday' tag.
Stargate: Atlantis - Rated: K+ - English - Angst/Romance - Chapters: 1 - Words: 1,261 - Reviews: 5 - Favs: 3 - Published: 2/8/2009 - John S., Teyla E. - Complete
A Hair's Breadth by Negolith reviews
Written for ga-unicorn and the LJ sheppard hc secret Santa exchange. After an accident in the city, John finds himself trapped and a hair's breadth away from certain death.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 8,453 - Reviews: 33 - Favs: 60 - Follows: 2 - Published: 1/18/2009 - John S., E. Lorne - Complete
A Proposal Like So by sakurablue13 reviews
A lovely coda for the final episode of SGA Quoted from my beta
Stargate: Atlantis - Rated: K - English - Drama/Romance - Chapters: 1 - Words: 3,557 - Reviews: 9 - Favs: 20 - Follows: 5 - Published: 1/10/2009 - John S., Teyla E. - Complete
Through the Looking Glass by Kristen999 reviews
Madness is to think of too many things in succession too fast, or of one thing too exclusively” - Voltaire. There is something odd going on with John and Rodney. Maybe everyone. Or it could be the darkness closing in.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 2 - Words: 19,381 - Reviews: 22 - Favs: 20 - Published: 1/7/2009 - John S., Rodney M. - Complete
Summit of Courage by CoolBreeze1 reviews
He would have screamed if he’d had the breath to. Instead he froze, his eyes locked with that of the Iratus bug’s. And then the insect leapt. Spoilers up through Season 2's "Runner" and specifically for "38 Minutes."
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 6 - Words: 18,522 - Reviews: 100 - Favs: 57 - Follows: 34 - Updated: 1/7/2009 - Published: 1/2/2009 - John S.
An Infirmary Christmas by Frisco reviews
On a world where Atlantis is a myth and the Wraith are childhood tales, Sheppard and team are captured for information. Surviving is only the beginning. Warning: contains scenes of torture Sheppard .
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 14,198 - Reviews: 24 - Favs: 49 - Follows: 3 - Published: 12/27/2008 - John S. - Complete
When He Touches Her by ltcoljsheppard reviews
A friendship explored and contemplated.
Stargate: Atlantis - Rated: T - English - Friendship/Romance - Chapters: 1 - Words: 3,931 - Reviews: 10 - Favs: 4 - Follows: 2 - Published: 12/18/2008 - John S., Teyla E. - Complete
Meridian by Gater101 reviews
OneShot. He found that, despite his protestations, he was glad of her company.
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 1 - Words: 1,562 - Reviews: 9 - Favs: 2 - Published: 10/5/2008 - John S., Teyla E. - Complete
Rattled by Kristen999 reviews
They are always escaping death, but Sheppard's newest close call will leave invisible wounds on them all. Team fic. H/C. Drama
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Drama - Chapters: 1 - Words: 8,640 - Reviews: 22 - Favs: 37 - Follows: 3 - Published: 10/1/2008 - John S. - Complete
Walk Alone by Gater101 reviews
OneShot. She doesn't want to walk alone but she will, if she must.
Stargate: Atlantis - Rated: K+ - English - Angst - Chapters: 1 - Words: 1,402 - Reviews: 8 - Favs: 7 - Published: 9/28/2008 - John S., Teyla E. - Complete
Everyone's Got To Eat by Gater101 reviews
OneShot. Kanaan observes familiarity and wonders when it will be his.
Stargate: Atlantis - Rated: K+ - English - Angst - Chapters: 1 - Words: 1,312 - Reviews: 10 - Favs: 6 - Follows: 3 - Published: 9/28/2008 - John S., Teyla E. - Complete
Trust by obsessed1 reviews
John and his brother are kidnapped by the Trust and have to escape.
Stargate: Atlantis - Rated: K+ - English - Angst/Hurt/Comfort - Chapters: 8 - Words: 26,360 - Reviews: 131 - Favs: 100 - Follows: 40 - Updated: 9/15/2008 - Published: 9/8/2008 - John S. - Complete
Running To The End by Wedjatqi reviews
John faces a battle that he is unlikely to survive and it gets him thinking. Written for the Beya JT Prompt battle.
Stargate: Atlantis - Rated: T - English - Drama/Romance - Chapters: 1 - Words: 1,750 - Reviews: 8 - Favs: 7 - Follows: 3 - Published: 9/9/2008 - John S., Teyla E. - Complete
Magnificent Desolation by CoolBreeze1 reviews
Sailing through the air, unattached to planet or gravity - that's John Sheppard's dream - but he soon learns that even this world holds hidden dangers. Shep whump - set in early season 4, minor spoiler for Adrift.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Adventure - Chapters: 1 - Words: 9,378 - Reviews: 16 - Favs: 30 - Follows: 1 - Published: 9/7/2008 - John S., Ronon D. - Complete
Black Water by Kristen999 reviews
Bogs, bullets, bugs, and bonding. Sheppard and the Team are in trouble and things go downhill from there.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Adventure - Chapters: 1 - Words: 5,689 - Reviews: 23 - Favs: 27 - Published: 9/4/2008 - John S. - Complete
Never Say Goodbye by Eildon Rhymer reviews
Sheppard's badly injured, Rodney's falling apart, the enemy's closing on them, and recent events are circling, ready to come to a head. Shrine spoilers. Rodney angst, Shep whump, and some Rodney whump.
Stargate: Atlantis - Rated: K+ - English - Angst/Hurt/Comfort - Chapters: 1 - Words: 5,417 - Reviews: 29 - Favs: 68 - Follows: 2 - Published: 9/4/2008 - Rodney M., John S. - Complete
ImagoThe Tao of John by Kristen999 reviews
Imago: a creature in its final stage of development. John receives a gift that might be used to destroy the Wraith. It might also kill him. Can his team convince him that the cost is too high? Team plus Carson and Elizabeth “Tao of Rodney” AU
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 4 - Words: 51,101 - Reviews: 61 - Favs: 58 - Follows: 17 - Updated: 8/29/2008 - Published: 8/25/2008 - John S. - Complete
Threshold For Pain by MacGateFan reviews
Sheppard is captured and tortured to find out his threshold for pain. Problem is, this wasn't an actual experiment. It was suggested by an old Genii "friend".
Stargate: Atlantis - Rated: K+ - English - Angst - Chapters: 1 - Words: 4,359 - Reviews: 3 - Favs: 9 - Published: 8/26/2008 - Complete
The Experience of Contrasts by Wedjatqi reviews
John and Teyla together. Response to another Beya LJ Challenge. JT obviously!
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 1 - Words: 1,110 - Reviews: 12 - Favs: 6 - Follows: 2 - Published: 8/20/2008 - John S., Teyla E. - Complete
One Night by moms2398 reviews
John and "Snacks" OC Helena take a one night vacation from life and it leads... Reading "Snacks" is not necessary but helpful. Definitely HET, non-explicit PWP, Shep/OC, with language. Quite a bit racier than "Snacks". AU series of what might be. R&R
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 20 - Words: 43,921 - Reviews: 104 - Favs: 36 - Follows: 21 - Updated: 8/1/2008 - Published: 2/13/2008 - John S. - Complete
Spirit by SGAFan reviews
Sheppard and his team have to fight for their lives when the Wraith capture them. But for the hope of freedom, they'll have to survive in world they've never faced before. Will have some Shep whump and is rated T for now...
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 10 - Words: 43,232 - Reviews: 156 - Favs: 39 - Follows: 44 - Updated: 7/24/2008 - Published: 2/20/2008 - John S., Ronon D. - Complete
Irreplacable by kashkow reviews
Just a little AU left turn for Irresistible. I had an idea and since it involved torturing John I went with it. Second half of story posted as separate story as nothing wants to work for me. Unbetaed! Chapters 1-8
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 1 - Words: 40,770 - Reviews: 12 - Favs: 44 - Follows: 8 - Published: 7/22/2008 - John S. - Complete
Brought to the Brink by godsdaughter77 reviews
John Sheppard goes on a mission, but gets captured…whump and angst ensue.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 14 - Words: 32,068 - Reviews: 113 - Favs: 65 - Follows: 29 - Updated: 7/19/2008 - Published: 7/1/2008 - John S. - Complete
An Introduction by rubycaspar reviews
Carson is introduced to a certain someone. SPOILERS for series four and five. Written for Gater101 for her birthday.
Stargate: Atlantis - Rated: K+ - English - Friendship/Angst - Chapters: 1 - Words: 1,195 - Reviews: 15 - Favs: 5 - Published: 6/24/2008 - Carson B., John S. - Complete
End of the Line by CoolBreeze1 reviews
Sheppard reaches his limits when he's captured by a group after the city of Atlantis. Prequel to the story, Going Home. Warnings: some torture, Shep whump.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 5 - Words: 16,977 - Reviews: 37 - Favs: 46 - Follows: 9 - Published: 6/3/2008 - John S. - Complete
Paternity by Wedjatqi reviews
Michael calls into question the paternity of Teyla's child. J/T
Stargate: Atlantis - Rated: T - English - Romance/Drama - Chapters: 6 - Words: 11,039 - Reviews: 98 - Favs: 45 - Follows: 82 - Updated: 5/20/2008 - Published: 1/12/2008 - John S., Teyla E.
Empty Vessels by Eildon Rhymer reviews
Four people awake separately in the ruins with no memory of who they are, and there is something in the darkness, and it wants them. Team angst and Shep whump.
Stargate: Atlantis - Rated: K+ - English - Adventure/Hurt/Comfort - Chapters: 11 - Words: 33,817 - Reviews: 96 - Favs: 48 - Follows: 19 - Updated: 5/17/2008 - Published: 5/12/2008 - John S., Rodney M. - Complete
Commiseration by Wedjatqi reviews
John and Carson share a drink and discuss women and love. Very Mild season 5 spoilers. JT and Carson/OC
Stargate: Atlantis - Rated: T - English - Drama/Romance - Chapters: 1 - Words: 2,412 - Reviews: 10 - Favs: 10 - Follows: 5 - Published: 5/11/2008 - John S., Teyla E. - Complete
You GoWe Go by Kristen999 reviews
Things don't go well for Ronon and Sheppard on “Limestone World.” Bonding, sacrifice, the usual for our heroes.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 2,463 - Reviews: 23 - Favs: 28 - Published: 4/28/2008 - John S., Ronon D. - Complete
Shades of Grey by SGAFan reviews
Holding a member of Kolya's strike force prisoner was always going to be... complicated. When John Sheppard tries to win Sora's trust in order to gain valuable intelligence that will help in the search for a ZPM, he has to decide whether he can return tha
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 3 - Words: 56,947 - Reviews: 21 - Favs: 22 - Follows: 1 - Published: 3/25/2008 - John S., Elizabeth W. - Complete
Practise to Deceive by Eildon Rhymer reviews
Something is very wrong on Atlantis, and Sheppard is at the heart of it, walking a very dangerous path.
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 17 - Words: 80,334 - Reviews: 365 - Favs: 62 - Follows: 41 - Updated: 3/4/2008 - Published: 2/18/2008 - John S. - Complete
But Not Farewell by AnCa reviews
On a routine mission something goes wrong with the Jumper, Sheppard whumpage and Teyla/Sheppard Friendship follows. Rodney and Ronon get a look-in for good behaviour. COMPLETE.
Stargate: Atlantis - Rated: K+ - English - Chapters: 14 - Words: 20,896 - Reviews: 251 - Favs: 52 - Follows: 80 - Updated: 3/1/2008 - Published: 2/20/2007 - John S., Teyla E. - Complete
Cold Comfort by Kristen999 reviews
He seeks warmth while inviting the darkness. Sheppard and Team Comfort. Written for FlashFic Freezing challenge.
Stargate: Atlantis - Rated: K+ - English - Angst/Drama - Chapters: 1 - Words: 1,263 - Reviews: 15 - Favs: 26 - Follows: 1 - Published: 2/6/2008 - John S. - Complete
The Other Side by Eildon Rhymer reviews
An explosion leaves Sheppard and McKay trapped and injured on opposite sides of a sealed door. Time is running out, and there is nothing to do but wait for rescue... and to talk. Set after Outcast, and containing spoilers for that episode.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 4,863 - Reviews: 25 - Favs: 61 - Published: 2/5/2008 - John S., Rodney M. - Complete
Follow The Leader by everybetty reviews
Lorne makes a snap decision and does whatever he can to keep Sheppard alive. Written for the Secret Santa exchange on SheppardHC. Rated T for language and brief nudity.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 8,325 - Reviews: 27 - Favs: 73 - Follows: 6 - Published: 1/5/2008 - E. Lorne, John S. - Complete
Evander's Heir by ShepsReyna reviews
Sheppard learns it is more about him than he could ever imagine. His gene is strongest for a reason, and he learns why. Shepcentric but team invovled, even O'Neill. Shep whump sprinkled through this adventure. Not a fairy tale! AU if that fits better
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 17 - Words: 81,527 - Reviews: 168 - Favs: 183 - Follows: 80 - Updated: 12/30/2007 - Published: 10/9/2007 - John S. - Complete
They That Walk Beside by Kodiak Bear Country reviews
Written for the 2007 Sheppard hc Secret Santa. Tensions run high between Ronon and Rodney. A mission meant to give them time to work it out. But things never go the way they are supposed to and now Sheppard’s life is in their hands.
Stargate: Atlantis - Rated: T - English - Chapters: 1 - Words: 23,872 - Reviews: 30 - Favs: 68 - Follows: 1 - Published: 12/27/2007 - John S., Rodney M. - Complete
Going Home by Titan5 reviews
John is sent back to Earth to recover from his latest set of injuries and decides to visit his father. He is very surprised at the homecoming he receives.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 20 - Words: 95,609 - Reviews: 804 - Favs: 281 - Follows: 140 - Updated: 11/24/2007 - Published: 10/8/2007 - Complete
Alone by SGAFan reviews
Not your ordinary, every day, trip through the Stargate... at least not for John Sheppard. COMPLETE! Warning: There be Whump here!
Stargate: Atlantis - Rated: K+ - English - Chapters: 8 - Words: 27,580 - Reviews: 185 - Favs: 64 - Follows: 50 - Updated: 10/21/2007 - Published: 8/9/2007 - John S. - Complete
Old Ghosts by Kristen999 reviews
Sheppard has to recognize the darkness before he can move past it. A redux retelling of the episode “Vengeance”.
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 1 - Words: 4,614 - Reviews: 12 - Favs: 12 - Published: 9/20/2007 - John S., Ronon D. - Complete
Pieces of the Whole by Kristen999 reviews
The team are captured and learn that there are two forms of torture, not knowing which one is worse. Lots of Team emotional whump—Shep whump.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 13,384 - Reviews: 38 - Favs: 62 - Follows: 6 - Published: 9/15/2007 - John S., Rodney M. - Complete
Shattered by SGAFan reviews
A close shave with death leaves John Sheppard searching for answers. Warning: Shep Whump!
Stargate: Atlantis - Rated: K+ - English - Drama - Chapters: 11 - Words: 38,140 - Reviews: 210 - Favs: 56 - Follows: 62 - Updated: 8/5/2007 - Published: 2/22/2007 - John S. - Complete
Honor Bound by Kristen999 reviews
Sometimes all that matters are the codes and values you uphold. A deadly vendetta will test loyalties, limits and friendships, with more at stake than anyone realizes. Contains Shep Whump. John,Ronon, Rodney Friendship
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Drama - Chapters: 18 - Words: 82,638 - Reviews: 320 - Favs: 117 - Follows: 61 - Updated: 7/27/2007 - Published: 6/9/2007 - John S., Ronon D. - Complete
Complicated by rubycaspar reviews
In 'The Seer' Teyla tells Davos that her situation is complicated. He has no idea... solar flares, darkened rooms and giant plants SHEYLA, major spoilers for Series Four. COMPLETE.
Stargate: Atlantis - Rated: M - English - Romance/Drama - Chapters: 5 - Words: 14,943 - Reviews: 67 - Favs: 37 - Follows: 12 - Updated: 7/15/2007 - Published: 6/26/2007 - Teyla E., John S. - Complete
Desperation by Kristen999 reviews
Nothing is ever black and white in the Pegasus galaxy. Rodney and John face a deadly threat where time is not the only enemy. Whumping and Angst.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Drama - Chapters: 1 - Words: 6,799 - Reviews: 26 - Favs: 58 - Published: 3/22/2007 - Rodney M., John S. - Complete
Falling by Lorr reviews
Something like this was bound to happen sooner or later. Sheppard gets into deep water and there may not be anything anyone can do to help. This takes place in season 3 after Common Ground. Minor Common Ground spoilers.
Stargate: Atlantis - Rated: K+ - English - Sci-Fi/Drama - Chapters: 5 - Words: 25,143 - Reviews: 36 - Favs: 59 - Follows: 10 - Published: 2/25/2007 - John S., Carson B. - Complete
Fate's Fickle Humor by PyroDragon2006 reviews
A simple visit to Atlantis by two members of SG1 sets off a chain of events that could change past, present, and future forever. And not for the better. Crossover with SG1. Rated T for some strong language.
Stargate: Atlantis - Rated: T - English - Adventure/Humor - Chapters: 13 - Words: 35,360 - Reviews: 148 - Favs: 49 - Follows: 49 - Updated: 2/6/2007 - Published: 6/29/2006
Special Delivery by ValleyA reviews
A quake traps Sheppard and McKay under ground with a pregnant woman. Shep whumpage, lots of buddy bonding, and the guys learn of a couple new things they never wanted to learn about.
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 6 - Words: 20,888 - Reviews: 44 - Favs: 40 - Follows: 2 - Published: 1/23/2007 - John S., Rodney M. - Complete
A World of Hurt: Loss by Alipeeps reviews
Part of a series of Shep whumpy tag fics to Season 3 eps. Sunday tag. SPOILERS FOR SUNDAY! It hasn't hit him yet.... COMPLETE
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 1 - Words: 2,250 - Reviews: 40 - Favs: 16 - Follows: 2 - Published: 1/16/2007 - John S., Teyla E. - Complete
Nobody said it was easy by Kodiak Bear Country reviews
Sheppard and McKay are trapped in a cave Sheppard reflects on how he got to where he is on his birthday.
Stargate: Atlantis - Rated: T - English - Chapters: 1 - Words: 6,516 - Reviews: 51 - Favs: 32 - Follows: 2 - Published: 1/5/2007 - John S. - Complete
Icarus by Kodiak Bear Country reviews
An Asuran trap snares Sheppard. Written for the Sheppard HC secret santa.
Stargate: Atlantis - Rated: T - English - Chapters: 1 - Words: 9,981 - Reviews: 28 - Favs: 21 - Published: 12/29/2006 - John S. - Complete
Of Madmen, Minions, and Christmas Miracles by katstales reviews
COMPLETE The team gates to a planet to investigate a long abandoned Ancient weapons lab and makes a shocking discovery that nearly proves fatal for Sheppard. Gen ShepWhump RononWhump.
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 2 - Words: 12,355 - Reviews: 12 - Favs: 17 - Follows: 2 - Published: 12/29/2006 - Complete
The Healing of Lt Colonels by Stargalaxy reviews
After being rescued from three months of torture, Sheppard must find his way home through himself and his friends. Oneshot. Complete.
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 1 - Words: 5,578 - Reviews: 31 - Favs: 34 - Follows: 1 - Published: 12/18/2006 - John S., Rodney M. - Complete
What Doesn't Kill You by wraithkeeper reviews
Sheppard is held captive and tortured for information. Contains torture, obviously, and lots of Shep whump!
Stargate: Atlantis - Rated: T - English - Chapters: 1 - Words: 973 - Reviews: 21 - Favs: 17 - Follows: 1 - Published: 12/14/2006 - John S. - Complete
Darkness Surrounds Us by RoaringMice reviews
He'd never really thought of a life without flying.
Stargate: Atlantis - Rated: T - English - Angst/Sci-Fi - Chapters: 6 - Words: 9,723 - Reviews: 68 - Favs: 15 - Follows: 19 - Updated: 11/13/2006 - Published: 11/6/2006 - John S., Rodney M. - Complete
Deus Ex Machina by b7-kerravon reviews
After Trinity, Sheppard, McKay, and Zelenka are at a remote lighthouse to finish a murdered scientist's research. Now it seems someone really doesn't want the work completed, and isn't above killing again... Complete!
Stargate: Atlantis - Rated: K+ - English - Mystery/Adventure - Chapters: 18 - Words: 44,227 - Reviews: 305 - Favs: 45 - Follows: 28 - Updated: 9/30/2006 - Published: 8/22/2006 - John S., Rodney M. - Complete
The Turmoil Within by PyroDragon2006 reviews
Common Ground Tag. John struggles to deal with conflicting emotions from Kolya's kidnapping and his own past. John's POV. New chapters for other characters added.
Stargate: Atlantis - Rated: K+ - English - Angst/Drama - Chapters: 7 - Words: 13,208 - Reviews: 63 - Favs: 41 - Follows: 13 - Updated: 9/13/2006 - Published: 8/31/2006 - John S. - Complete
Old Wood Best to Burn by Kodiak Bear Country reviews
An episode tag for Common Ground. Sheppardcentric.
Stargate: Atlantis - Rated: T - English - Chapters: 3 - Words: 20,047 - Reviews: 84 - Favs: 39 - Follows: 29 - Updated: 9/11/2006 - Published: 8/28/2006 - John S., Rodney M. - Complete
Inhuman by Maggie Sheppard reviews
Sheppard enters the event horizon after giving Elizabeth his usual boyish smile. She smiles back, not knowing that may be the last time she will see him smile. REPOSTED WITH SOME ADDITIONS AND GRAMMAR CORRECTIONS!
Stargate: Atlantis - Rated: M - English - Angst/Adventure - Chapters: 4 - Words: 71,179 - Reviews: 30 - Favs: 15 - Follows: 10 - Updated: 7/22/2006 - Published: 10/17/2005 - John S. - Complete
The worst kind of torture by Linnzi reviews
More Sheppard and McKay whumping, I'm afraid. I just can't help myself! Written for the leg wound challenge on the whump thread over at GW. Contains scenes of torture, though nothing too graphic. Final chapter posted.
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 18 - Words: 48,273 - Reviews: 322 - Favs: 81 - Follows: 55 - Updated: 7/18/2006 - Published: 5/12/2006 - John S., Rodney M. - Complete
Candle in the Dark by Sholio reviews
An accident leaves Sheppard and McKay a little too dependent on each other.
Stargate: Atlantis - Rated: T - English - Adventure/Suspense - Chapters: 1 - Words: 26,916 - Reviews: 69 - Favs: 123 - Follows: 5 - Published: 7/10/2006 - John S., Rodney M. - Complete
The Most Wonderful Feeling by Alipeeps reviews
Sheppard whump. Kinda dark. Implied torture. Written for the Sheppard HC LJ sensory loss challenge. Oneshot at present may well be continued later.
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 1 - Words: 1,623 - Reviews: 43 - Favs: 16 - Follows: 14 - Published: 7/5/2006 - John S.
What Friends Are For by ga unicorn reviews
The team goes to the mainland to help search for some missing boys. Do things ever remain that simple? Whumpage, some hc, and little angst.
Stargate: Atlantis - Rated: K+ - English - Adventure - Chapters: 1 - Words: 16,438 - Reviews: 14 - Favs: 20 - Published: 7/3/2006 - John S., Rodney M. - Complete
The Good Sheppard by LdyAnne reviews
John Sheppard is missing and in his place is a german sheppard with hazel eyes and a cocky smirk.
Stargate: Atlantis - Rated: T - English - Adventure/Drama - Chapters: 1 - Words: 10,410 - Reviews: 31 - Favs: 72 - Follows: 5 - Published: 5/7/2006 - Rodney M., Elizabeth W. - Complete
Can't get you out of my head by Linnzi reviews
The events of The Hive have not left Lt. Col. Sheppard untouched. As the team worries for his mental health, Sheppard becomes obsessed with finding his former lieutenant, Aiden Ford...COMPLETE.
Stargate: Atlantis - Rated: K+ - English - Drama/Adventure - Chapters: 7 - Words: 30,211 - Reviews: 75 - Favs: 19 - Follows: 23 - Updated: 4/24/2006 - Published: 4/14/2006 - John S.
That Which is Broken by Sholio reviews
After the events of Trinity, Teyla has a plan to repair the rift in her team, but what if there is a terrible cost? Friendship, whumping, team fic. Complete.
Stargate: Atlantis - Rated: T - English - Angst/Adventure - Chapters: 12 - Words: 64,161 - Reviews: 249 - Favs: 144 - Follows: 54 - Updated: 4/16/2006 - Published: 4/1/2006 - Rodney M., John S. - Complete
For the Love of a Friend by Astraldust reviews
Rodney’s in a spot of trouble and John bails him out. Shep whumping. Complete
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 11 - Words: 16,944 - Reviews: 135 - Favs: 50 - Follows: 37 - Updated: 4/8/2006 - Published: 3/31/2006 - John S., Rodney M. - Complete
The Day of Reckoning by Titan5 reviews
Kolya has a plan to exact restitution from Sheppard for his crimes against the Genii people and the Colonel ends up paying a high price.
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 20 - Words: 62,357 - Reviews: 465 - Favs: 93 - Follows: 35 - Updated: 1/30/2006 - Published: 12/31/2005 - Complete
Perspective by Sanssong reviews
With the Wraith baring down on them, a suspicious Sgt. Bates and a host of misunderstandings, can John and Teyla change their perspective and find love?
Stargate: Atlantis - Rated: T - English - Romance/Sci-Fi - Chapters: 6 - Words: 27,870 - Reviews: 16 - Favs: 10 - Follows: 10 - Updated: 8/8/2005 - Published: 6/18/2005 - John S., Teyla E.