atlantisfan
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Joined 09-30-17, id: 9807388
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Through a Len's Darkly by Thoseeyesoh reviews
Sheppard has to follow orders against his better judgment and worries this could be the end of his time on Atlantis one way or another when the lives of everyone he knows are threatened. Some cameo roles in this story, but it's the usual team and a couple of new OC's that make this a darker tale than usual. COMPLETE
Stargate: Atlantis - Rated: T - English - Drama/Hurt/Comfort - Chapters: 9 - Words: 59,185 - Reviews: 42 - Favs: 7 - Follows: 13 - Updated: 7/19 - Published: 5/18 - Rodney M., John S., Teyla E., Ronon D. - Complete
Murus by Thoseeyesoh reviews
When an expected trade mission turns sour, the team find themselves in an unknown world. There, John Sheppard falls ill with a virus but that is the least of his problems. Team fic but Shep centred. *COMPLETE*
Stargate: Atlantis - Rated: K+ - English - Friendship/Hurt/Comfort - Chapters: 12 - Words: 71,949 - Reviews: 72 - Favs: 10 - Follows: 10 - Updated: 4/27 - Published: 3/12 - John S., Ronon D., OC - Complete
Terminal Trivialities by The Mind Of The Dragon reviews
John Sheppard awakes in agony with only Rodney McKay to help him. With no memory of what happened, John fights to win a battle of which he has no knowledge. What things await them in the forest? Where are the rest of his team? Let's find out...
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Sci-Fi - Chapters: 34 - Words: 61,759 - Reviews: 148 - Favs: 27 - Follows: 58 - Updated: 4/14 - Published: 6/23/2019 - Rodney M., John S.
Stay by Needing-To-Shut-Up-But-Unable reviews
He thought he was screaming, but he did not know, as he heard nothing, felt nothing but the pain, saw nothing but the blackness and as sudden as it had started, it ended, leaving him with a single whispered word: stay.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Mystery - Chapters: 29 - Words: 31,992 - Reviews: 78 - Favs: 23 - Follows: 49 - Updated: 4/1 - Published: 1/1/2018 - Rodney M., John S., Carson B., E. Lorne - Complete
The Wall by Thoseeyesoh reviews
John Sheppard lies in the Infirmary hurt and obviously drugged. He had been missing for two days. Can he make sense of what happened before it's too late for another member of the team. The gangs all here. No pairings. *COMLETE *
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 5 - Words: 11,427 - Reviews: 19 - Favs: 7 - Follows: 11 - Updated: 10/15/2020 - Published: 10/10/2020 - John S. - Complete
The Pilot and The Athosian by Thoseeyesoh reviews
Perhaps carrying an injured and unconscious Teyla into the Monastery had been a bad idea for them both but there was no choice in the matter. Mainly Shep Whump ahead but Teyla whump too. Mainly John and Teyla but whole Team will be there...NOW COMPLETE!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Suspense - Chapters: 6 - Words: 14,903 - Reviews: 33 - Favs: 11 - Follows: 10 - Updated: 7/21/2020 - Published: 7/11/2020 - John S., Teyla E. - Complete
Rodney Mckay: Anti-Drug Advocate by Obsessive Explosion reviews
John is exploring Atlantis when he accidentally ingests some hallucinogenic algae. Terrified and alone, he has to rely on Rodney to rescue him and bring him to safety.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 4 - Words: 14,290 - Reviews: 19 - Favs: 13 - Follows: 8 - Updated: 6/23/2020 - Published: 6/20/2020 - Rodney M., John S. - Complete
Rodney gets a Well-Earned Apology by Obsessive Explosion reviews
John is captured and severely tortured, and when his team rescues him, he accidentally hurts Rodney in his confusion.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 4 - Words: 15,557 - Reviews: 12 - Favs: 19 - Follows: 8 - Updated: 5/6/2020 - Published: 5/4/2020 - Rodney M., John S., Aiden F., Teyla E. - Complete
Guilt can be shared by ChaosisMyMiddleName13 reviews
Abrams and Gall are dead, and so is the Wraith. McKay and John manage to get into the jumper for the flight back to Atlantis. John is hurt, but not only in the physical way. Tag to 1x12
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 1,060 - Reviews: 6 - Favs: 5 - Follows: 2 - Published: 2/21/2020 - Rodney M., John S.
Charade by Mickey3 reviews
John had barely moved ten feet from his cell when he doubled over and groaned softly, clutching his stomach at the sudden, intense pain. He swore to himself that, if he ever got his hands on the rotten, vertically challenged son-of-a-bitch who'd poisoned him, he kill the bastard.
Stargate: Atlantis - Rated: K+ - English - Drama/Hurt/Comfort - Chapters: 1 - Words: 2,372 - Reviews: 4 - Favs: 7 - Published: 10/5/2019 - Complete
Haunted by the past by SuperMom1 reviews
John's in trouble again, but it isn't his fault. John and Rodney exploring an ancient lab, of course there's going to be trouble and some whump for a certain Colonel. Can be read on it's own, or It could be a prequel to the Pegasus series.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 7 - Words: 19,015 - Reviews: 44 - Favs: 25 - Follows: 21 - Updated: 8/8/2019 - Published: 8/1/2019 - Rodney M., John S., Carson B. - Complete
Cull by Salchat reviews
John discovers that a friendly planet has been culled by the Wraith. His team help him to deal with his suppressed emotional pain.
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 2 - Words: 3,178 - Reviews: 11 - Favs: 12 - Follows: 4 - Published: 7/31/2019 - Rodney M., John S., Teyla E., Ronon D. - Complete
In the Grip of Uncertainty by Elanshaw reviews
John and Carson are pulled into a world that tests their friendship...and their sanity. Shep whump / Beckett whump.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 37 - Words: 57,001 - Reviews: 104 - Favs: 23 - Follows: 18 - Updated: 5/17/2019 - Published: 2/12/2019 - John S., Carson B. - Complete
Home by Rachel500 reviews
When John saves the day and is severely injured, he wonders if he should retire and return to Earth.
Stargate: Atlantis - Rated: T - English - Drama/Hurt/Comfort - Chapters: 1 - Words: 5,200 - Reviews: 12 - Favs: 21 - Follows: 5 - Published: 4/26/2019 - John S. - Complete
Hanging by a Thread by sheppardlover928 reviews
SUMMARY: Rodney has saved them many times using his brain, but this time it's his physical attributes that are needed. Shepwhump and teamwork abound.
Stargate: Atlantis - Rated: K+ - English - Sci-Fi/Hurt/Comfort - Chapters: 1 - Words: 3,631 - Reviews: 14 - Favs: 7 - Follows: 4 - Published: 3/27/2019 - Rodney M., John S., Teyla E., Ronon D.
Between a Rock and a Hard Place by Titan5 reviews
Trapped and completely immobilized by a cave-in, John waits and hopes his team is alive to rescue him.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 5,087 - Reviews: 28 - Favs: 33 - Follows: 9 - Published: 2/19/2019 - Complete
Unhinged by obsessed1 reviews
After a disastrous mission, Sheppard's away team start exhibiting out of character behaviour. H/C Angst Any mistakes are my own.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 14,935 - Reviews: 12 - Favs: 5 - Follows: 4 - Published: 10/6/2018
Anything for My Best Friend by SciFiJ reviews
New rewritten summary: After a mission goes sideways, its up to Rodney to find a way to help John heal. Adventure into the unknown ensues! As always, reviews are treasured :)
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 10 - Words: 19,466 - Reviews: 41 - Favs: 12 - Follows: 30 - Updated: 5/27/2018 - Published: 6/4/2016 - Rodney M., John S.
Alone by Littleforest reviews
Stranded on desolate planet, broken and betrayed by those closest to him, John Sheppard struggles to survive. With their memories affected, his team try to remember what happened to him. Alone and hurt, John does everything he can to try and forget.
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 15 - Words: 52,642 - Reviews: 272 - Favs: 106 - Follows: 148 - Updated: 12/27/2017 - Published: 2/6/2016 - Rodney M., John S., Teyla E., Ronon D.
Celebrate Me Home by Dragonflysoul reviews
SG1 rescues Daniel after he's abducted and tortured for nearly a week. Daniel has trouble dealing. This is a prequel that concludes in my SPN/SG1 crossover, "A Very Supernatural and SG1 Christmas" (posted in 2012).
Stargate: SG-1 - Rated: T - English - Drama/Hurt/Comfort - Chapters: 1 - Words: 3,147 - Reviews: 5 - Favs: 21 - Follows: 3 - Published: 12/23/2017 - D. Jackson, J. O'Neill - Complete
A Very Supernatural and SG1 Christmas by Dragonflysoul reviews
Just your ordinary Christmas story with ghosts and claw-wielding, flesh-eating monsters. Sam Winchester Whump, Daniel Jackson whump, and of course, protective Dean Winchester and Jack O'Neill! Takes place SPN post 7.10 and SG1 season 3. (SG1 prequel now added. "Celebrate Me Home")
Crossover - Stargate: SG-1 & Supernatural - Rated: K+ - English - Hurt/Comfort - Chapters: 1 - Words: 9,158 - Reviews: 58 - Favs: 132 - Follows: 34 - Updated: 12/23/2017 - Published: 12/25/2011 - J. O'Neill, Dean W. - Complete
TEAM by T'Pring reviews
Sheppard, Teyla, Ronon and Rodney are trapped in a maze of deadly clues. Sheppard is injured and with time running out, Rodney must solve the ultimate puzzle - how to escape before John succumbs to poison and they are all trapped forever.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Mystery - Chapters: 4 - Words: 8,966 - Reviews: 48 - Favs: 48 - Follows: 11 - Published: 10/26/2017 - Complete
Not My Blood by water4willows reviews
A scuffle with the indigenous people on a planet has dire consequences for John. Written for a whump fic exchange over on Tumblr. Shep!whump, a little Rodney!whump.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 1 - Words: 3,868 - Reviews: 12 - Favs: 33 - Follows: 3 - Published: 10/19/2017 - Complete
Second String by Late2SGA reviews
An entry in the Ancient database leads the Team to a facility with hoped-for Ancient tech...or is the technology more than they hoped for? Takes place S3, before Tao of Rodney. Team fic.
Stargate: Atlantis - Rated: K - English - Suspense/Angst - Chapters: 1 - Words: 5,966 - Reviews: 12 - Favs: 8 - Follows: 3 - Published: 10/5/2017 - John S. - Complete
Delirium by Tvist reviews
They had just moved in to their nice suburbia house when Oliver finally succumbed to the fact that he was sick. Felicity had been waiting for him to admit it and for him to finally crash. She didn't expect him to crash just as hard as he did though, but knowing Oliver she shouldn't have expected him to do anything the easy way.
Arrow - Rated: K - English - Angst/Hurt/Comfort - Chapters: 7 - Words: 9,571 - Reviews: 5 - Favs: 46 - Follows: 26 - Updated: 7/26/2017 - Published: 7/10/2017 - Oliver Q./Arrow/Green Arrow, Felicity S./Overwatch - Complete
Safe by trufflemores reviews
Oliver prefers to be a little spoon. He likes feeling safe.
Arrow - Rated: K - English - Hurt/Comfort/Romance - Chapters: 1 - Words: 2,203 - Reviews: 4 - Favs: 36 - Follows: 13 - Published: 7/14/2017 - [Oliver Q./Arrow/Green Arrow, Felicity S./Overwatch] - Complete
Soldier On by trufflemores reviews
5.17. After being tortured by Chase, Oliver needs more help than he's willing to admit. That's what family is for.
Arrow - Rated: T - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 4,021 - Reviews: 8 - Favs: 52 - Follows: 17 - Published: 7/11/2017 - [Oliver Q./Arrow/Green Arrow, Felicity S./Overwatch] John D./Spartan - Complete
Banished by Titan5 reviews
This is an AU ending to the season five episode Inquisition. Let's just say that John is not a happy camper.
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 3 - Words: 28,690 - Reviews: 57 - Favs: 49 - Follows: 18 - Updated: 3/23/2017 - Published: 3/21/2017 - John S. - Complete
Instinct: More Than Just Survival by KeianaLunae reviews
A creature's instinct to survive is strong; It's also about more than just escape. Set in S2E08 "Conversion": What else did Sheppard do during his time as an Iratus-Human hybrid? Lorne knows the truth and has to deal with the fall-out.. but he can't fix everything alone. [Sheppard, Lorne, OFC]
Stargate: Atlantis - Rated: T - English - Sci-Fi/Drama - Chapters: 14 - Words: 26,908 - Reviews: 31 - Favs: 22 - Follows: 14 - Updated: 3/5/2017 - Published: 1/22/2017 - John S., E. Lorne - Complete
The Wrath of Kanaan by nherbie reviews
Kanaan is less than pleased with the relationship between Teyla and Lt. Colonel John Sheppard and decides to do something about it.
Stargate: Atlantis - Rated: K+ - English - Angst/Hurt/Comfort - Chapters: 4 - Words: 22,610 - Reviews: 41 - Favs: 67 - Follows: 32 - Updated: 1/22/2017 - Published: 1/3/2017 - Rodney M., John S., Teyla E., Kanaan - Complete
Protecting the Protector by usa123 reviews
Wyatt shows up to Mason Industries injured but determined to go on the next mission. It's up to Lucy and Rufus to look after him in the past. Team bonding abounds.
Timeless - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 3,790 - Reviews: 15 - Favs: 59 - Follows: 19 - Published: 12/22/2016 - G. Flynn, Lucy P., Rufus C., Wyatt L. - Complete
Dust to Dust by ellijay reviews
The events of "Serpent's Song" prompt Daniel to return to Egypt.
Stargate: SG-1 - Rated: K+ - English - Drama/Angst - Chapters: 3 - Words: 8,691 - Reviews: 1 - Favs: 9 - Follows: 1 - Published: 11/9/2016 - S. Carter, D. Jackson, J. O'Neill, Teal'c - Complete
Stumbling Around in the Dark: A Whumpaween Fic by TheShadowArchitect reviews
John Sheppard has terrible luck with Secret Ancient Labs(TM). For @justwhumpythings Whumpaween fic exchange.
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 3,133 - Reviews: 8 - Favs: 17 - Follows: 1 - Published: 11/8/2016 - Rodney M., John S., Carson B., Ronon D. - Complete
Small Comfort by SciFiJ reviews
After Sheppard makes a surprising return after weeks missing, will the team be able to heal the apparent psychological damage? And why is he so attached to that tiny little kitten?
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 3 - Words: 6,317 - Reviews: 23 - Favs: 27 - Follows: 17 - Updated: 6/13/2016 - Published: 6/11/2016 - Rodney M., John S., Teyla E., Ronon D. - Complete
When Time Is Up (Full Story) by gluegirl56 reviews
A hidden address in Janus own database lead to an unexplored and unknown world, to danger and destruction, to a divided and distrusting people on the brink of war, to a tribe people with old ancient tie ins. Sheppard gets separated from his team and his journey back is a struggle for survival. Will they find each other again before it's too late?
Stargate: Atlantis - Rated: K+ - English - Adventure/Hurt/Comfort - Chapters: 26 - Words: 65,082 - Reviews: 85 - Favs: 30 - Follows: 39 - Updated: 2/20/2016 - Published: 7/26/2015 - Rodney M., John S., Teyla E., Ronon D. - Complete
Skewed by sheppardlover928 reviews
The team go offworld for a meet and greet but things go wrong when John and Rodney are captured, the gate is disabled and the Daedulus is back on Earth!
Stargate: Atlantis - Rated: K+ - English - Chapters: 15 - Words: 20,977 - Reviews: 100 - Favs: 16 - Follows: 30 - Updated: 1/26/2016 - Published: 9/2/2014 - Rodney M., John S., Teyla E., Carson B.
Unscathed by shepsgirl72 reviews
Sheppard is rescued apparently unharmed following his abduction by bloodthirsty space pirates...or so it seems. But what really happened during the six weeks he was missing? Some dark moments in this story. And Shep!Whump...naturally!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Sci-Fi - Chapters: 7 - Words: 48,719 - Reviews: 97 - Favs: 86 - Follows: 40 - Updated: 1/6/2016 - Published: 12/16/2015 - John S. - Complete
Three Days In the Life of Rodney McKay by T'Pring reviews
Rodney McKay was an ambitious man, but his ambitions were of the intellectual variety. He could care less about money as long as there were plenty of people around telling him he was the smartest guy in the room. He had that title neatly wrapped up (whenever Sam wasn't on base) until a certain John Sheppard sauntered into the Antarctic Base.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 1 - Words: 7,848 - Reviews: 40 - Favs: 110 - Follows: 17 - Published: 1/5/2016 - Rodney M., John S. - Complete
Dream A Little Dream of Me by Toe-Separator reviews
Instead of jumping from one person to another, the entity remained in John Sheppard. AUish twist to Doppelganger! Shep-whump and a lot of angst. McKay/Sheppard friendship in later chapters. NO SLASH.
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 5 - Words: 13,797 - Reviews: 12 - Favs: 16 - Follows: 21 - Updated: 11/15/2015 - Published: 7/22/2013 - Rodney M., John S. - Complete
Forget Me Not by Alidravana reviews
Matt Murdock learns to never accept a drink from a stranger. Written for a Daredevil Kink Meme prompt.
Daredevil - Rated: M - English - Angst/Hurt/Comfort - Chapters: 2 - Words: 2,731 - Reviews: 4 - Favs: 28 - Follows: 30 - Updated: 6/24/2015 - Published: 6/12/2015 - Matt M., Foggy N. - Complete
Stars in the Sky by Eilidh17 reviews
Sometimes the past has a way of catching up with us. Tag to Moebius. Takes place any time after season 9's Ethon.
Stargate: SG-1 - Rated: K+ - English - Angst - Chapters: 1 - Words: 5,757 - Reviews: 14 - Favs: 10 - Follows: 2 - Published: 3/23/2015 - D. Jackson, J. O'Neill - Complete
The Journey by Soul of the Evenstar reviews
This story begings after Arrow 3x09, dealing with Oliver's Journey after what happens to him after 'The Climb'. And how Team Arrow will get him back, meaning there are two storylines that eventually become one.
Arrow - Rated: T - English - Angst/Hurt/Comfort - Chapters: 19 - Words: 25,122 - Reviews: 33 - Favs: 63 - Follows: 116 - Updated: 1/25/2015 - Published: 12/15/2014 - Oliver Q./Arrow/Green Arrow, Felicity S./Overwatch, Ra's al Ghul
Tunnel Vision by T'Pring reviews
Sheppard's in a cold dark place, literally. Rodney must guide John through a monster-infested tunnel before either broken ribs, killer cockroaches, or radiation kills him. Written for Sheppard H/C Winter Fic Exchange 2014 over on LiveJournal.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 3 - Words: 12,445 - Reviews: 28 - Favs: 75 - Follows: 10 - Published: 1/4/2015 - Rodney M., John S., Teyla E., Ronon D. - Complete
Arrows in Flight by whiteraven1606 reviews
Oliver's PTSD and everyone's reactions/attempts to help woven through the first season. (This is canon compliant for through the end of season one.)
Arrow - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 4 - Words: 7,128 - Reviews: 17 - Favs: 201 - Follows: 208 - Updated: 1/3/2015 - Published: 7/27/2013 - Oliver Q./Arrow/Green Arrow, Tommy M., John D./Spartan, Felicity S./Overwatch
Westward to Pegasus by Space-Age Scribe reviews
John Sheppard arrived in Pegasus Valley simply wanting a fresh start in life after finally ending his military career back East. He never expected to find a family in the people of Atlantis ... or that his worst nightmare had preceded him. Western AU.
Stargate: Atlantis - Rated: K+ - English - Friendship/Drama - Chapters: 27 - Words: 39,318 - Reviews: 120 - Favs: 22 - Follows: 13 - Updated: 11/9/2014 - Published: 8/24/2014 - John S., Ronon D., Teyla E. - Complete
Empire of Dirt by DevinBourdain reviews
He should have just listened to John's constant complaints, came out of his lab for air once and awhile instead of waiting for Sheppard to drag him out kicking and screaming, that mistake was now going to haunt Rodney for the rest of his life. Inadvertently leaving Rodney in charge was a lapse in judgement that Sheppard and Rodney would take to the grave.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 3 - Words: 8,425 - Reviews: 10 - Favs: 17 - Follows: 8 - Updated: 8/31/2014 - Published: 8/21/2014 - Rodney M., John S. - Complete
Accidents by godsdaughter77 reviews
John gets in an accident and conflict ensues. John and Rodney both get whumped and its set during the time Elizabeth and Carson still inhabit Atlantis. NOW COMPLETE!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 10 - Words: 43,556 - Reviews: 194 - Favs: 110 - Follows: 108 - Updated: 7/20/2014 - Published: 10/16/2008 - Rodney M., John S. - Complete
Never Give In by MickyD777 reviews
When Mckay is captured - seemingly by the Wraith - Sheppard must launch a rescue mission to get him back. There are complications, however, and Sheppard may be in over his head this time. Unexpected allies, shocking discoveries, undying loyalty. Shep Whump. Slight Mckay Whump. Takes place a few months after "Common Ground". NOTE: ON HIATUS. I WILL CONCLUDE AS SOON AS POSSIBLE.
Stargate: Atlantis - Rated: T - English - Chapters: 5 - Words: 9,157 - Reviews: 25 - Favs: 11 - Follows: 33 - Updated: 7/1/2014 - Published: 1/23/2014 - Rodney M., John S.
Whistling a Symphony by Marzipan77 reviews
Set during the Season 4 ep "Serpent's Venom," Daniel is struggling with the build-up of loss in his life. Sarah Gardner was just taken by Osiris, very close to an anniversary Daniel is not looking forward to. The tension within SG-1 is getting to him. Perhaps there's a solution - a fairly easy solution - but it's going to take a heart-to-heart with his taciturn best friend.
Stargate: SG-1 - Rated: T - English - Angst - Chapters: 1 - Words: 5,318 - Reviews: 13 - Favs: 31 - Follows: 10 - Published: 5/28/2014 - S. Carter, D. Jackson, J. O'Neill, Teal'c - Complete
On the Fringe of Reality by Astraldust reviews
A simple mission to look for an Ancient laboratory causes all sorts of problems for Sheppard and McKay from vicious creatures to doubles. Sheppard whump and angst for them both.
Stargate: Atlantis - Rated: T - English - Angst/Friendship - Chapters: 20 - Words: 53,599 - Reviews: 139 - Favs: 26 - Follows: 23 - Updated: 3/22/2014 - Published: 2/17/2014 - Rodney M., John S. - Complete
Phone Calls from John the Baptist by Marzipan77 reviews
They were quick to send Daniel away, to drug him, and restrain him behind padded walls. They called him schizophrenic. His sickness created by the Stargate, Daniel's greatest achievement. From diagnosis to hypothesis to treatment, there must have been so much more that went on behind the scenes. And surely Daniel's friends - his family - wouldn't abandon him so easily.
Stargate: SG-1 - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 8 - Words: 22,576 - Reviews: 27 - Favs: 34 - Follows: 10 - Updated: 3/15/2014 - Published: 3/12/2014 - D. Jackson, J. O'Neill - Complete
IT WAS by sheppardlover928 reviews
Major John Sheppard is having nightmares and second guessing his actions. Set right after season one, The Rising
Stargate: Atlantis - Rated: K - English - Angst - Chapters: 1 - Words: 2,145 - Reviews: 8 - Favs: 4 - Follows: 1 - Published: 4/17/2013 - John S., Aiden F. - Complete
Over the Edge by Space-Age Scribe reviews
Tag to 3x09 - 'Phantoms'. The device had been disabled and the Daedalus was on its way. The mission was over, and now the survivors could limp home to recover. But for John Sheppard, the problems caused by the Wraith device back on the planet were just beginning.
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Friendship - Chapters: 15 - Words: 18,387 - Reviews: 99 - Favs: 51 - Follows: 28 - Updated: 1/15/2013 - Published: 1/3/2013 - John S., Teyla E. - Complete
Stuck by BrynnH87 reviews
Written for 2012 Secret Santa. Prompt: Sheppard has to put aside his own injuries to care for a team mate. This can be a team mate of your choice, but it's only the 2 of them, stranded off-world with limited resources. Said team mate can be injured more seriously or in the end Sheppard's injuries were more severe, your choice. I prefer pre-season 4 in the "Weir and Beckett" era.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 1 - Words: 4,459 - Reviews: 4 - Favs: 26 - Follows: 6 - Published: 1/5/2013 - John S., Ronon D. - Complete
Hope Is A Waking Dream by scifi-karis reviews
This is a tag to pilgrim soul's story, "No Distance Left To Run." Sheppard is not dead, but has been captured by the enemy. Trapped on a world in which he cannot escape and knowing his team believes he is dead, Sheppard is on the run with no team, no backup, and no chance of rescue. Shep whump. Please read "No Distance Left To Run" by pilgrim soul first!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 18 - Words: 25,960 - Reviews: 125 - Favs: 44 - Follows: 27 - Updated: 11/4/2012 - Published: 10/7/2012 - John S.
Soldier by Elanshaw reviews
John loses himself. Shep whump.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 10 - Words: 20,158 - Reviews: 59 - Favs: 41 - Follows: 30 - Updated: 10/12/2012 - Published: 8/19/2012 - John S., Rodney M. - Complete
Aftermath: Finding His Way Again by NewEnglandFan reviews
John struggles to recover emotionally after his terrible experiences on Earth. Anger and guilt are not allowing him to heal. Who can help him, if he can't help himself? This is a sequel to "Evil Intent." Please read that first, so you can understand "Aftermath." Thank you!
Stargate: Atlantis - Rated: K+ - English - Angst/Hurt/Comfort - Chapters: 3 - Words: 5,559 - Reviews: 15 - Favs: 13 - Follows: 9 - Updated: 9/18/2012 - Published: 9/13/2012 - John S., Teyla E. - Complete
Renewing the Voice by Space-Age Scribe reviews
Maybe John Sheppard hadn't been healed as well as he originally thought. Epilogue to the SGA novel Blood Ties.
Stargate: Atlantis - Rated: K - English - Hurt/Comfort - Chapters: 1 - Words: 4,333 - Reviews: 10 - Favs: 19 - Follows: 1 - Published: 4/3/2012 - John S. - Complete
JUSTICE by JoaniexJony reviews
When John is convicted of killing an innocent he has more to face than hard time. Serious Shep whump, and major angst for the team as John is sent to the worst prison in the Pegasus galaxy. Set in season 5. Keller is there, but Carson is the main doc.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 19 - Words: 60,540 - Reviews: 323 - Favs: 76 - Follows: 38 - Updated: 3/17/2012 - Published: 2/12/2012 - John S. - Complete
Stranger in a strange land by Roo1965 reviews
As Sheppard recovers from a mission gone bad, John wonders if it's him, the drugs or if something really is wrong with his team and everyone else on Atlantis. set Phantoms 3.9, before Irresponsible 3.13, mention of 2.17 Coup D'état.ShepHC LJ summerfic
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 7,256 - Reviews: 2 - Favs: 4 - Follows: 1 - Published: 10/19/2011 - John S. - Complete
Remember by LinziDay reviews
Pain is easy for John to hide. Other things are not. Written for the Sheppard hc summer 2011 fic exchange.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 4,967 - Reviews: 18 - Favs: 60 - Follows: 4 - Published: 8/7/2011 - John S., Rodney M. - Complete
Once Upon A Time by T'Pring reviews
...a certain John Sheppard hit his head. Well, a tree hit his head. In a lightning storm a mile from the stargate. At night. Huddled in a cave with a very befuddled John, his team must figure out how to get him home.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 3 - Words: 8,347 - Reviews: 23 - Favs: 83 - Follows: 10 - Published: 8/5/2011 - John S. - Complete
Phantoms by psychstudent reviews
Sheppard suffers an emotional trauma from the events of Phantoms.
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 2 - Words: 3,657 - Reviews: 8 - Favs: 12 - Follows: 16 - Updated: 4/21/2011 - Published: 12/30/2010 - John S.
Orpheus Rising by everybetty reviews
Rodney and the team work to bring John home, then fight to bring him out of the darkness. Set post S5.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 12,103 - Reviews: 22 - Favs: 47 - Follows: 4 - Published: 2/21/2011 - John S., Rodney M. - Complete
Diary of an Angst Ridden Temporary Commander by Tari Roo reviews
Cameron Mitchell has to take temporary command of Atlantis after Sheppard has an accident with an ancient device that reduces to him to the mental age of 3. This, is Cam's diary.
Stargate: Atlantis - Rated: K - English - Chapters: 1 - Words: 2,402 - Reviews: 11 - Favs: 14 - Follows: 5 - Published: 1/23/2011 - Complete
Come and Try by Tari Roo reviews
Prompt fic: Aftermath ficlet. John is back home after being held captive and tortured. Pure comfort, with the team finding their way around him.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 2,357 - Reviews: 16 - Favs: 40 - Follows: 3 - Published: 1/13/2011 - John S. - Complete
Obsession by T'Pring reviews
Serving under the famous Lt. Col. John Sheppard isn't quite what new recruit, Alex Weiss, is expecting. When John takes a team of Marines to a boring little island in the middle of a typhoon things get really interesting.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 7 - Words: 40,541 - Reviews: 61 - Favs: 115 - Follows: 16 - Updated: 1/5/2011 - Published: 1/4/2011 - John S. - Complete
Come One, Come All: Part Deux by Sterenyk Strey reviews
'He'd let the exilaration of gliding on thermals lull him into believing he was invincible.' Wing!Shep whump/angst. Sequel to COCA. Enjoy! XD
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Fantasy - Chapters: 5 - Words: 19,821 - Reviews: 32 - Favs: 17 - Follows: 7 - Updated: 11/18/2010 - Published: 11/10/2010 - Rodney M., John S., Teyla E., Ronon D. - Complete
Beastly Things by Stealth Dragon reviews
Another day, another culture, another nightmare. Shep whump, Gen.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Horror - Chapters: 1 - Words: 3,543 - Reviews: 18 - Favs: 37 - Follows: 5 - Published: 11/2/2010 - John S. - Complete
Three Embraces by T'Pring reviews
John Sheppard was an island fortress - strong, but distant. He did not invite others to cross the divide, but twice, she had reached for him...
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 1 - Words: 2,343 - Reviews: 28 - Favs: 36 - Follows: 3 - Published: 10/7/2010 - Teyla E., John S. - Complete
Relativity by KathainBowen reviews
Patient John Sheppard is dying in a psychiatric institute after a horrific accident, unable to separate himself from delusions of being a hero in the fabled city of Atlantis. One shot!
Stargate: Atlantis - Rated: M - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 28,675 - Reviews: 18 - Favs: 36 - Follows: 5 - Published: 10/5/2010 - John S., Rodney M. - Complete
Initium by shepsgirl72 reviews
When Sheppard is rescued after becoming trapped on an alien planet, his team inadvertently bring home more than just an injured colleague. Shep Whump!
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Sci-Fi - Chapters: 20 - Words: 85,089 - Reviews: 226 - Favs: 80 - Follows: 53 - Updated: 8/6/2010 - Published: 7/7/2010 - John S. - Complete
Hero Defined by stella-pegasi reviews
Sheppard takes a restless Colonel Caldwell on an easy diplomatic mission off-world. However, the easy mission becomes a matter of life and death as the two colonels are kidnapped and Sheppard is gravely injured.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Adventure - Chapters: 1 - Words: 19,902 - Reviews: 32 - Favs: 96 - Follows: 7 - Published: 7/13/2010 - John S., Steven C. - Complete
Poker Night by Sterenyk Strey reviews
' "You tried to escape, John." Uh, no, lady. He really didn't. He'd been too caught up in struggling to die. Maybe that's what she meant.' Inquisition tag. Shep whump. John S/OC - see shepsgirl72's Deliverance trilogy and A/N. Warnings: torture/profanity. *grins whumpily*
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 6 - Words: 18,361 - Reviews: 46 - Favs: 33 - Follows: 13 - Updated: 6/19/2010 - Published: 6/12/2010 - Rodney M., John S., Teyla E., Ronon D. - Complete
Tormented by The Mind Of The Dragon reviews
COMPLETE! With the rest of the team coping with the aftermath of the last mission, John Sheppard finds it increasingly hard to stay grounded in reality. Sequel to The Consuming Darkness. Lots of Whump and angst. :
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 14 - Words: 31,790 - Reviews: 63 - Favs: 42 - Follows: 40 - Updated: 6/9/2010 - Published: 10/9/2009 - John S., Rodney M. - Complete
Another Man's Shoes by everybetty reviews
What makes a man? John and Carson each struggle with the question...only John’s life hangs in the balance.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 22,008 - Reviews: 18 - Favs: 42 - Follows: 4 - Published: 3/16/2010 - John S., Carson B. - Complete
Neverland by race-the-ace reviews
*Mild SLASH*-Sheppard/Mitchell--Sequel to The Only One--Since meeting John, or more accurately meeting John’s parents, Cam had read more books on surviving abuse then anyone should ever have to read.
Crossover - Stargate: SG-1 & Stargate: Atlantis - Rated: M - English - Angst/Romance - Chapters: 1 - Words: 17,658 - Reviews: 11 - Favs: 53 - Follows: 5 - Published: 3/2/2010 - C. Mitchell, John S. - Complete
Need by clair beaubien reviews
Missing scene to Need: what happened after Daniel broke down in the storage closet. Now up Ch2: Jack's POV
Stargate: SG-1 - Rated: K - English - Hurt/Comfort/Angst - Chapters: 2 - Words: 14,182 - Reviews: 25 - Favs: 101 - Follows: 14 - Updated: 2/17/2010 - Published: 2/5/2010 - D. Jackson, J. O'Neill - Complete
Madacran by Elanthra reviews
Sheppard and McKay find themselves on opposing sides of a slave revolt. 'Has life no value to you unless it is sacrificed ? ' Shep Whump. WARNING! M Rated for violence, nudity and bad language.
Stargate: Atlantis - Rated: M - English - Adventure/Hurt/Comfort - Chapters: 18 - Words: 94,102 - Reviews: 72 - Favs: 23 - Follows: 12 - Updated: 2/13/2010 - Published: 1/19/2010 - John S., Rodney M. - Complete
Enslaved by JoaniexJony reviews
John is captured by a woman who wants him as her consort but when Shep refuses he's made her slave. Question is can rescue come before their friend is broken beyond repair? Serious Shep whump and team angst Set in Season 3 with Elizabeth and Carson.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 7 - Words: 15,721 - Reviews: 64 - Favs: 43 - Follows: 24 - Updated: 1/20/2010 - Published: 1/10/2010 - John S., Elizabeth W. - Complete
Cold Nights by Titan5 reviews
Another short comment fic written for LJ. John's team rescues him, but he's a little confused and he's definitely not helping.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 3,152 - Reviews: 24 - Favs: 48 - Follows: 4 - Published: 1/18/2010 - Complete
Second Impressions by Marzipan77 reviews
Missing scenes between parts 1 and 2 of Children of the Gods. How does Daniel Jackson fit back into life on Earth and in the SGC? What made Hammond change his mind about the archaeologist?
Stargate: SG-1 - Rated: T - English - Angst/Family - Chapters: 1 - Words: 8,428 - Reviews: 21 - Favs: 57 - Follows: 10 - Published: 1/7/2010 - D. Jackson, Gen. Hammond - Complete
Hypothesis by kwillads reviews
Comfort comes from an unexpected source when John is unknowingly hurt in a trip and fall accident. Spoilers: Season's 1-5, Rated T for mild language, Chapter 2 has a warning. Story complete, but will be posted in 2 parts.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 2 - Words: 37,041 - Reviews: 93 - Favs: 257 - Follows: 35 - Updated: 9/18/2009 - Published: 9/16/2009 - John S., Steven C. - Complete
A Time to Heal by PyroDragon2006 reviews
John thought it was over, but when a new presidential advisor and an old enemy both show up on Atlantis, the wounds run deep. Set after Common Ground, so SPOILERS! Now COMPLETE!
Stargate: Atlantis - Rated: T - English - Drama/Adventure - Chapters: 18 - Words: 53,959 - Reviews: 383 - Favs: 194 - Follows: 133 - Updated: 8/30/2009 - Published: 12/14/2006 - John S., Rodney M. - Complete
Runner Too by Beyond Atlantis VS 6 reviews
When John is captured by the Wraith he finds himself reliving a trial that one of his team has already undergone, only this time there are even more complications and threats to Sheppards life.
Stargate: Atlantis - Rated: M - English - Drama/Adventure - Chapters: 1 - Words: 45,206 - Reviews: 5 - Favs: 19 - Follows: 1 - Published: 8/17/2009 - John S. - Complete
Obliterated by Kreek reviews
Sheppard has to confront his worst fears when he fails to keep Rodney safe. Shep & McKay whump. COMPLETE.
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 16 - Words: 48,909 - Reviews: 125 - Favs: 80 - Follows: 34 - Updated: 7/26/2009 - Published: 7/6/2009 - John S., Rodney M. - Complete
All The King's Men by tielan reviews
Sanity is a fine line between the scars of the past and the belief in a hopeful future. But after a long captivity, John may no longer be capable of the balancing act. COMPLETE
Stargate: Atlantis - Rated: M - English - Hurt/Comfort/Drama - Chapters: 10 - Words: 11,442 - Reviews: 53 - Favs: 23 - Follows: 10 - Updated: 4/10/2009 - Published: 3/24/2009 - John S. - Complete
To Face What Comes by Frisco reviews
When a prison sentence and an experiment rip John's memories from him, his team must help him find himself again. Spoilers through The Prodigal. Contains scenes of violence.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 17,013 - Reviews: 27 - Favs: 58 - Follows: 6 - Published: 3/25/2009 - John S. - Complete
The Astonishing Persistence Of Memory: Past Time by tielan reviews
The last they saw of him was as Kolya's prisoner, drained by the Wraith. When Atlantis finds John Sheppard living in a Pegasus village, they endeavour to reclaim who he was. And if there are things he can't remember, there are others he can't forget. FIN
Stargate: Atlantis - Rated: T - English - Drama/Adventure - Chapters: 14 - Words: 69,367 - Reviews: 132 - Favs: 53 - Follows: 42 - Updated: 2/12/2009 - Published: 12/3/2008 - John S. - Complete
Freezing Point by Kristen999 reviews
Accident statistics say ninety-two percent of avalanche victims survive if their party digs them out within fifteen minutes. After forty-five minutes, Rodney and the Team were still searching for Sheppard.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Drama - Chapters: 1 - Words: 9,756 - Reviews: 24 - Favs: 130 - Follows: 4 - Published: 1/28/2009 - John S., Rodney M. - Complete
Summit of Courage by CoolBreeze1 reviews
He would have screamed if he’d had the breath to. Instead he froze, his eyes locked with that of the Iratus bug’s. And then the insect leapt. Spoilers up through Season 2's "Runner" and specifically for "38 Minutes."
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 6 - Words: 18,522 - Reviews: 106 - Favs: 80 - Follows: 38 - Updated: 1/7/2009 - Published: 1/2/2009 - John S.
In Time of War by Eildon Rhymer reviews
They had never expected to end up in a war zone. Sheppard is captured, but rescuing him is only the beginning, because Sheppard is badly hurt, the Gate is inaccessible, and enemies are everywhere. Written for the Sheppard hc Secret Santa on LJ.
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 1 - Words: 15,227 - Reviews: 34 - Favs: 70 - Follows: 9 - Published: 12/28/2008 - John S., Rodney M. - Complete
An Infirmary Christmas by Frisco reviews
On a world where Atlantis is a myth and the Wraith are childhood tales, Sheppard and team are captured for information. Surviving is only the beginning. Warning: contains scenes of torture Sheppard .
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 14,198 - Reviews: 26 - Favs: 70 - Follows: 4 - Published: 12/27/2008 - John S. - Complete
Down Time by Lorr reviews
Maybe it was one too many burned out planets. Maybe it was one too many friends lost. Maybe it was shouldering responsilibity for so many taken by the Wraith. Even his closest friends are beginning to wonder if Sheppard is succumbing to the pressure.
Stargate: Atlantis - Rated: K+ - English - Sci-Fi/Drama - Chapters: 12 - Words: 44,434 - Reviews: 32 - Favs: 83 - Follows: 15 - Published: 12/17/2008 - John S., Rodney M. - Complete
Just A Little Freakout by wneleh reviews
After Remnants SGA 5x15 , John freaks out, just a little. Because this fandom needs more emo!John smarm.
Stargate: Atlantis - Rated: K+ - English - Angst - Chapters: 1 - Words: 690 - Reviews: 7 - Favs: 12 - Follows: 2 - Published: 11/21/2008 - John S., Rodney M. - Complete
Aftershocks by everybetty reviews
There is no way, in my world, that John Sheppard suffered no repercussions in Remnants.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 1 - Words: 2,970 - Reviews: 28 - Favs: 56 - Follows: 2 - Published: 11/17/2008 - John S., R. Woolsey - Complete
Lust by kittytrypsin reviews
Team Sheppard travels to a new world to establish friendly trade but the natives have their eye on something that's not on the table. Set season 3 pre-Sunday as I'm too fond of Carson, with Elizabeth and a few OCs. Rated K , violence, cussing but NO sex!
Stargate: Atlantis - Rated: K+ - English - Adventure/Hurt/Comfort - Chapters: 17 - Words: 39,350 - Reviews: 88 - Favs: 14 - Follows: 10 - Updated: 10/16/2008 - Published: 9/30/2008 - John S. - Complete
Another Step by Eildon Rhymer reviews
Pursued by men who want to kill him, an injured Sheppard struggles to find his way back to his team.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort - Chapters: 1 - Words: 5,685 - Reviews: 25 - Favs: 109 - Follows: 8 - Published: 10/2/2008 - John S., Ronon D. - Complete
Unhinged by Titan5 reviews
When John’s team is captured, John is tortured for information. Things don’t get much easier, even after they escape. Written for the 2nd Annual Ficathon at ShepsAtlantis.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 16,881 - Reviews: 52 - Favs: 102 - Follows: 17 - Published: 8/6/2008 - Complete
Say, Wasn't This In 'Slither? by Negolith reviews
And episode tag to "The Seed". Basically the oh so missing whump scene our poor woobie Sheppard goes through. Contains major spoiler for the big climax scene of the episode.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 1 - Words: 3,981 - Reviews: 13 - Favs: 39 - Follows: 2 - Published: 7/25/2008 - John S. - Complete
Brought to the Brink by godsdaughter77 reviews
John Sheppard goes on a mission, but gets captured…whump and angst ensue.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 14 - Words: 32,068 - Reviews: 116 - Favs: 93 - Follows: 35 - Updated: 7/19/2008 - Published: 7/1/2008 - John S. - Complete
Into The Nadir by Laatija reviews
Somewhere, within the depths of an injudicious city, darkness waits. Trouble is brewing and the fate of millions of people lies in the hands of a very unsuspecting colonel. Chaos has found him, now what will he do? Whump in abundance.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Mystery - Chapters: 34 - Words: 59,279 - Reviews: 305 - Favs: 43 - Follows: 56 - Updated: 7/11/2008 - Published: 10/17/2007 - John S. - Complete
I Have Almost Forgot the Taste of Fears by rubycaspar reviews
Set series 5. An accident causes John to lose his memory of the past three and a half years. How does a series 1 John fit in with a series 5 Atlantis? Teamfic with a Sheyla twist to it.
Stargate: Atlantis - Rated: T - English - Angst/Friendship - Chapters: 8 - Words: 19,573 - Reviews: 178 - Favs: 41 - Follows: 98 - Updated: 5/28/2008 - Published: 3/12/2008 - John S., Teyla E.
The Inner Light by Kristen999 reviews
John decides to live inside his dreams, knowing all that is left is to chew on his fingers and watch his mind slip away. This is a remix of skypig21's “The Known World"
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 5,433 - Reviews: 8 - Favs: 15 - Published: 5/28/2008 - John S., Rodney M. - Complete
Empty Vessels by Eildon Rhymer reviews
Four people awake separately in the ruins with no memory of who they are, and there is something in the darkness, and it wants them. Team angst and Shep whump.
Stargate: Atlantis - Rated: K+ - English - Adventure/Hurt/Comfort - Chapters: 11 - Words: 33,817 - Reviews: 96 - Favs: 55 - Follows: 24 - Updated: 5/17/2008 - Published: 5/12/2008 - John S., Rodney M. - Complete
The Connection by Daring Duo reviews
A tag to The Real World by Merlin71, Kodiak Bear Country, and Titan5.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 18 - Words: 48,192 - Reviews: 237 - Favs: 22 - Follows: 28 - Updated: 4/28/2008 - Published: 4/8/2008 - Complete
Blame, Responsibility and Justice by CazzBlade reviews
Colonel Sheppard is arrested offworld. Whump ensues...
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 1 - Words: 10,798 - Reviews: 17 - Favs: 29 - Follows: 1 - Published: 4/18/2008 - John S. - Complete
Practise to Deceive by Eildon Rhymer reviews
Something is very wrong on Atlantis, and Sheppard is at the heart of it, walking a very dangerous path.
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 17 - Words: 80,334 - Reviews: 369 - Favs: 78 - Follows: 46 - Updated: 3/4/2008 - Published: 2/18/2008 - John S. - Complete
The Healing Touch by Lynt reviews
Epilogue of a sort for Crystal Skull. A story about Daniel and his appendix.
Stargate: SG-1 - Rated: T - English - Angst - Chapters: 1 - Words: 3,822 - Reviews: 6 - Favs: 40 - Follows: 2 - Published: 2/11/2008 - D. Jackson, J. O'Neill - Complete
Castles in the Sky by Stealth Dragon reviews
Sheppard is captured and to be a slave to the wraith. It becomes more than a matter of survival, but also a matter of keeping his sanity.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 31 - Words: 138,421 - Reviews: 870 - Favs: 206 - Follows: 89 - Updated: 2/8/2008 - Published: 9/27/2007 - John S. - Complete
Cold Comfort by Kristen999 reviews
He seeks warmth while inviting the darkness. Sheppard and Team Comfort. Written for FlashFic Freezing challenge.
Stargate: Atlantis - Rated: K+ - English - Angst/Drama - Chapters: 1 - Words: 1,263 - Reviews: 16 - Favs: 33 - Follows: 3 - Published: 2/6/2008 - John S. - Complete
Three for the Price of Two by kwillads reviews
John was right, the price paid was too high. John is hurt, but overcomes the challenge he faces. Shep Whump in the worst way.
Stargate: Atlantis - Rated: T - English - Drama/Friendship - Chapters: 11 - Words: 87,302 - Reviews: 29 - Favs: 61 - Follows: 10 - Updated: 2/6/2008 - Published: 8/17/2007 - John S. - Complete
Almost Healthy by Sheppy reviews
Sheppard's condition takes a turn for the worst after 'Conversion'....LOTS of Shep whump... Dang, he just looks so good when he's whumped g NOW REWRITTEN!
Stargate: Atlantis - Rated: K - English - Drama/Angst - Chapters: 15 - Words: 31,013 - Reviews: 219 - Favs: 74 - Follows: 34 - Updated: 2/5/2008 - Published: 10/3/2005 - John S. - Complete
Siren by Stealth Dragon reviews
They need only to survive the night. Ronon/Sheppard friendship.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 9,835 - Reviews: 37 - Favs: 70 - Follows: 4 - Published: 1/30/2008 - Ronon D., John S. - Complete
No Bridge too High v2 by emergencyfan reviews
Trapped off world on a collapsed bridge, Ronon must care for Sheppard until help can arrive. Wet adaptation of Nebbyjen's original story - No Bridge Too High.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 4 - Words: 9,487 - Reviews: 20 - Favs: 51 - Follows: 3 - Published: 1/14/2008 - John S., Ronon D. - Complete
Follow The Leader by everybetty reviews
Lorne makes a snap decision and does whatever he can to keep Sheppard alive. Written for the Secret Santa exchange on SheppardHC. Rated T for language and brief nudity.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Friendship - Chapters: 1 - Words: 8,325 - Reviews: 29 - Favs: 101 - Follows: 9 - Published: 1/5/2008 - E. Lorne, John S. - Complete
Between the Devil and the Deep Blue Sea by CoolBreeze1 reviews
A visit to a beautiful planet has disastrous consequences for John Sheppard. The team races to find out what's wrong with him, but the answers they seek may be buried deeper than they imagined. Shep whump. Minor spoilers for Common Ground.
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 18 - Words: 44,771 - Reviews: 158 - Favs: 67 - Follows: 46 - Updated: 1/3/2008 - Published: 12/12/2007 - John S. - Complete
Evander's Heir by ShepsReyna reviews
Sheppard learns it is more about him than he could ever imagine. His gene is strongest for a reason, and he learns why. Shepcentric but team invovled, even O'Neill. Shep whump sprinkled through this adventure. Not a fairy tale! AU if that fits better
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 17 - Words: 81,527 - Reviews: 180 - Favs: 277 - Follows: 113 - Updated: 12/30/2007 - Published: 10/9/2007 - John S. - Complete
Scrambled Brains on the Side, Please by Titan5 reviews
The team is captured by some acquaintances of Kolya, who just may have driven Sheppard over the edge in their attempt to find Atlantis.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Drama - Chapters: 1 - Words: 14,220 - Reviews: 35 - Favs: 58 - Follows: 4 - Published: 12/26/2007 - Complete
Waiting on Home by Dragonflysoul reviews
Lost, hurt and alone, Daniel struggles to remember, struggles to stay alive.
Stargate: SG-1 - Rated: K+ - English - Angst - Chapters: 1 - Words: 2,676 - Reviews: 27 - Favs: 58 - Follows: 21 - Updated: 12/20/2007 - Published: 12/18/2007 - D. Jackson, J. O'Neill - Complete
Liar, Liar by cause.A.scene reviews
COMPLETE Rodney returns to Atlantis after a long trip only to find more trouble back home. Guess who? Set before Sunday because this is fanfic and I can do that. Shep Whump in an interesting way...
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 8 - Words: 26,837 - Reviews: 100 - Favs: 71 - Follows: 39 - Updated: 12/17/2007 - Published: 11/9/2007 - John S., Rodney M. - Complete
White Walls by Eildon Rhymer reviews
Four went out, and three came back. Sheppard has vanished, and the rest of his team lies injured. As Sheppard and his team fight their own separate battles for hope and survival, the true danger may be different from what any of them expect
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 12 - Words: 61,642 - Reviews: 143 - Favs: 64 - Follows: 29 - Updated: 12/2/2007 - Published: 11/19/2007 - John S. - Complete
Going Home by Titan5 reviews
John is sent back to Earth to recover from his latest set of injuries and decides to visit his father. He is very surprised at the homecoming he receives.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 20 - Words: 95,609 - Reviews: 812 - Favs: 386 - Follows: 158 - Updated: 11/24/2007 - Published: 10/8/2007 - Complete
A Matter of Kindness by Miss Lestrade reviews
How can Rodney heal someone who has been through something not even he can accept? It's a matter of pain, trust, assistance, rejection, forgiveness, and above all, kindness. It's probably slash. Rated very strong T to light M. Please read warnings.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 6 - Words: 8,147 - Reviews: 25 - Favs: 14 - Follows: 17 - Updated: 11/21/2007 - Published: 11/11/2007 - John S., Rodney M. - Complete
Admitted by obsessed1 reviews
Sheppard ends up in hospital on earth with no sign of his team
Stargate: Atlantis - Rated: K - English - Chapters: 4 - Words: 11,777 - Reviews: 91 - Favs: 71 - Follows: 35 - Updated: 10/29/2007 - Published: 10/18/2007 - John S.
Alone by SGAFan reviews
Not your ordinary, every day, trip through the Stargate... at least not for John Sheppard. COMPLETE! Warning: There be Whump here!
Stargate: Atlantis - Rated: K+ - English - Chapters: 8 - Words: 27,580 - Reviews: 194 - Favs: 96 - Follows: 56 - Updated: 10/21/2007 - Published: 8/9/2007 - John S. - Complete
The Way Home by Frisco reviews
Security protocols on an Ancient outpost separate the team, and an accident leaves Sheppard and McKay injured. Can they find each other and the way home? Spoilers through The Return with one tiny one for The Game.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 8 - Words: 35,253 - Reviews: 185 - Favs: 81 - Follows: 54 - Updated: 10/8/2007 - Published: 9/13/2007 - John S., Rodney M. - Complete
Breaking His Resistance by Miss Lestrade reviews
What happens to Sheppard and after the events of Lifeline? This is my take on how he handles it. Lots of yummy Shep angst! No ship but friendship, and there's plenty to go around. Spoilers for Sunday, First Strike, and Lifeline.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 1,412 - Reviews: 9 - Favs: 20 - Published: 10/6/2007 - John S., Rodney M. - Complete
That Sinking Feeling by kashkow reviews
Things are not going well for John Sheppard, and they are about to get infinitely worse. Minor whumpage and slight angst. What more could anyone ask for? Rated T for the occasional bad word, some of them in Czech.
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 1 - Words: 52,659 - Reviews: 42 - Favs: 148 - Follows: 15 - Published: 9/21/2007 - John S., Rodney M. - Complete
Counting to Ten by taylyn10 reviews
Most Accidents happen in the home. They also happen to Daniel.
Stargate: SG-1 - Rated: T - English - Humor/Hurt/Comfort - Chapters: 1 - Words: 2,221 - Reviews: 24 - Favs: 67 - Follows: 7 - Published: 9/18/2007 - D. Jackson, J. O'Neill - Complete
Pieces of the Whole by Kristen999 reviews
The team are captured and learn that there are two forms of torture, not knowing which one is worse. Lots of Team emotional whump—Shep whump.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Angst - Chapters: 1 - Words: 13,384 - Reviews: 44 - Favs: 93 - Follows: 8 - Published: 9/15/2007 - John S., Rodney M. - Complete
When time is up by gluegirl56 reviews
Alone and near death on a desolated planet far away from Atlantis Sheppard is ready to give up but Carson is determined not to let him.
Stargate: Atlantis - Rated: T - English - Angst/Supernatural - Chapters: 1 - Words: 842 - Reviews: 4 - Favs: 11 - Follows: 2 - Published: 9/8/2007 - John S., Carson B. - Complete
Fade to Black by Daring Duo reviews
The sequel, or continuation, of The White Room in which John and Rodney get into all kinds of trouble working as slaves and battling Kolya.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort - Chapters: 18 - Words: 64,761 - Reviews: 231 - Favs: 64 - Follows: 36 - Updated: 9/7/2007 - Published: 8/2/2007 - Complete
Inebriation by obsessed1 reviews
Summary: It was supposed to be simple so how did their mission end with a very drunk, whumped Colonel. The link for this seems to be a bit touchy so if it doesn't work you can find this over at my livejournal in my authors profile.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Humor - Chapters: 9 - Words: 17,726 - Reviews: 105 - Favs: 56 - Follows: 24 - Updated: 8/28/2007 - Published: 8/6/2007 - John S., Rodney M.
Shattered by SGAFan reviews
A close shave with death leaves John Sheppard searching for answers. Warning: Shep Whump!
Stargate: Atlantis - Rated: K+ - English - Drama - Chapters: 11 - Words: 38,140 - Reviews: 212 - Favs: 79 - Follows: 63 - Updated: 8/5/2007 - Published: 2/22/2007 - John S. - Complete
To Return The Way I Was Before by Yum reviews
All it took was a single fall to show how fragile and important their friendship was. Formerly from Gateways. Contains spoilers from season 1 and 2.
Stargate: SG-1 - Rated: K+ - English - Angst/Hurt/Comfort - Chapters: 17 - Words: 64,140 - Reviews: 73 - Favs: 95 - Follows: 33 - Updated: 8/2/2007 - Published: 7/20/2007 - D. Jackson, J. O'Neill - Complete
The White Room by Daring Duo reviews
Sheppard seems to have lost his mind and no one can figure out why.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 24 - Words: 77,076 - Reviews: 317 - Favs: 82 - Follows: 45 - Updated: 7/24/2007 - Published: 6/4/2007 - Complete
Bless Me Father for I Have Sinned by spacegates reviews
A recuperating Sheppard finds temporary sanctuary in a church. An outsider’s view on Colonel Sheppard and his team. Angst & Team friendship.
Stargate: Atlantis - Rated: K+ - English - Angst/Friendship - Chapters: 1 - Words: 2,896 - Reviews: 19 - Favs: 26 - Follows: 1 - Published: 7/23/2007 - John S., Rodney M. - Complete
Overload by Lorr reviews
Sheppard halted them at the foot of the stairs. Elizabeth was between them, but he would only need to move his hand a couple of inches to aim the gun at either of the men.
Stargate: Atlantis - Rated: K+ - English - Drama/Hurt/Comfort - Chapters: 6 - Words: 19,784 - Reviews: 27 - Favs: 36 - Follows: 2 - Published: 7/22/2007 - John S., Carson B. - Complete
Chess Game by Yum reviews
Jack discovers some foundations aren't so easily repaired. Takes place after Shades of Gray This story was formerly from Gateways.
Stargate: SG-1 - Rated: K+ - English - Adventure/Angst - Chapters: 38 - Words: 91,650 - Reviews: 79 - Favs: 61 - Follows: 23 - Updated: 7/20/2007 - Published: 6/12/2007 - J. O'Neill, D. Jackson - Complete
The crimespree by Flowerhead101 reviews
When Sheppard activates an Ancient device nothing seems wrong. But when people start getting hurt, the Atlantis team start to investigate. Will they realize what's wrong with Sheppard?
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 9 - Words: 17,182 - Reviews: 41 - Favs: 20 - Follows: 19 - Updated: 7/14/2007 - Published: 3/29/2007 - John S. - Complete
Omitted by Daria6 reviews
Jack is concerned that Daniel is endangering himself, and the team, and takes action, only to have it backfire. FINISHED
Stargate: SG-1 - Rated: T - English - Drama/Angst - Chapters: 7 - Words: 29,655 - Reviews: 66 - Favs: 62 - Follows: 45 - Updated: 7/1/2007 - Published: 1/15/2007 - D. Jackson, J. O'Neill - Complete
Yard Work by taylyn10 reviews
Daniel deals with guilt and grief.
Stargate: SG-1 - Rated: K+ - English - Angst - Chapters: 1 - Words: 2,497 - Reviews: 7 - Favs: 6 - Published: 6/1/2007 - D. Jackson, J. O'Neill - Complete
Control by Alipeeps reviews
Sheppard was slurring his words.. Oneshot Sheppard whump fic John Sheppard meets heavy duty painkillers. COMPLETE.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Drama - Chapters: 1 - Words: 6,570 - Reviews: 57 - Favs: 103 - Follows: 9 - Published: 5/16/2007 - John S., Rodney M. - Complete
Uncommon Alliance by Stargalaxy reviews
COMPLETE. Captured and experimented on by the wraith, Sheppard must find a way to save himself before it's too late. Common Ground spoilers.
Stargate: Atlantis - Rated: T - English - Adventure/Hurt/Comfort - Chapters: 35 - Words: 135,021 - Reviews: 601 - Favs: 210 - Follows: 77 - Updated: 5/15/2007 - Published: 1/29/2007 - John S. - Complete
Incubator by Titan5 reviews
John is captured by aliens and experimented on. This is a creepy one.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 2 - Words: 16,853 - Reviews: 69 - Favs: 58 - Follows: 27 - Updated: 5/9/2007 - Published: 5/7/2007 - Complete
Desperate Hours by aloola reviews
A bounty hunter caused problems for our team during a routine trade negotiation. Set late season three. Now COMPLETE....
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Angst - Chapters: 16 - Words: 36,073 - Reviews: 176 - Favs: 37 - Follows: 21 - Updated: 4/30/2007 - Published: 4/4/2007 - John S. - Complete
Waking Up Dead by RadioShack84 reviews
After a difficult mission, John is feeling strange and having trouble coming to terms with what happened. Shep whump. NOT SLASH.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 1 - Words: 3,067 - Reviews: 14 - Favs: 24 - Follows: 5 - Published: 4/23/2007 - John S., Carson B. - Complete
Red Harvest by Yum reviews
I'm cured, was what Daniel said and Machello's legacy comes to an end. But when a fractured team comes back together, Col. Jack O'Neill realizes nothing is truly over or truly cured. Happens after Legacy.
Stargate: SG-1 - Rated: K+ - English - Adventure/Angst - Chapters: 13 - Words: 78,179 - Reviews: 45 - Favs: 83 - Follows: 18 - Updated: 4/2/2007 - Published: 3/10/2007 - D. Jackson, J. O'Neill - Complete
Protective Instincts by aloola reviews
On a simple mission, the team finds trouble looming when an ancient with a hidden past crosses their path.Now COMPLETE
Stargate: Atlantis - Rated: K - English - Hurt/Comfort/Drama - Chapters: 10 - Words: 29,009 - Reviews: 74 - Favs: 24 - Follows: 25 - Updated: 3/14/2007 - Published: 2/25/2007 - John S. - Complete
Seven Days in Atlantis by La Madrugada reviews
Cameron Mitchell spends a week in Atlantis, and learns a lot about his old buddy, John Sheppard.
Stargate: Atlantis - Rated: T - English - Chapters: 31 - Words: 28,587 - Reviews: 177 - Favs: 135 - Follows: 54 - Updated: 3/8/2007 - Published: 2/19/2007 - John S. - Complete
The Unkindest Cut by everybetty reviews
Caution! The Pegasus Galaxy contains many dangers. Like football, giant space ostriches and sharp edges. Herein be Shep whumping. Gen. COMPLETE. First fic so concrit, feedback appreciated.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Humor - Chapters: 5 - Words: 23,655 - Reviews: 56 - Favs: 62 - Follows: 13 - Updated: 3/2/2007 - Published: 2/26/2007 - John S. - Complete
To Square the Circle by Twinchy reviews
Setting: Season 3, some time after 'Common Ground', Story: Trading missions can be murder, Shep whump, McShep friendship, team story, Carson, Genii, Kolya, Now Complete!
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 10 - Words: 12,015 - Reviews: 79 - Favs: 21 - Follows: 29 - Updated: 2/22/2007 - Published: 1/29/2007 - John S., Rodney M. - Complete
Beatae Memoriae by sazz27 reviews
On a desolate alien planet, John Sheppard is lost in more ways than one.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 23 - Words: 87,708 - Reviews: 338 - Favs: 109 - Follows: 53 - Updated: 2/20/2007 - Published: 12/27/2006 - John S., Rodney M. - Complete
Stranded by Deana reviews
John and Carson accidentally crash a Jumper on the mainland, with no way to contact Atlantis for help. Of course, the desperate situation quickly turns life threatening for them both. NO SLASH.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 9 - Words: 16,533 - Reviews: 137 - Favs: 54 - Follows: 36 - Updated: 2/15/2007 - Published: 12/16/2006 - Carson B., John S. - Complete
The Ghosts of Atlantis by Reyson reviews
Mysterious ghosts are appearing in Atlantis trying to harm its inhabitants. The race is on to solve the mystery and save Sheppard, McKay, Carson and others from murderous phantoms intend on taking lives. Many get whumped. COMPLETE
Stargate: Atlantis - Rated: T - English - Mystery/Angst - Chapters: 23 - Words: 91,699 - Reviews: 434 - Favs: 65 - Follows: 52 - Updated: 2/12/2007 - Published: 9/30/2006 - John S. - Complete
The Known World by skypig21 reviews
Imprisoned by a cruel and repressive government, John, Rodney and Teyla are forced to make sacrifices to save each other's lives and keep the flame of hope burning. Warning: Very lightly implied noncon. Also, bugs.
Stargate: Atlantis - Rated: T - English - Drama/Adventure - Chapters: 21 - Words: 52,982 - Reviews: 427 - Favs: 107 - Follows: 67 - Updated: 1/24/2007 - Published: 12/21/2006 - John S., Rodney M. - Complete
Avatar by theEOWs reviews
She’s mad as a hornet and isn’t going to take it anymore. Atlantis encounters a resident just waiting for Daddy to come home. Cowritten by Stealth Dragon and drufan. You know there’s gotta be whump!
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 13 - Words: 35,736 - Reviews: 163 - Favs: 63 - Follows: 32 - Updated: 1/23/2007 - Published: 1/11/2007 - John S. - Complete
There's No Place Like Home by Dragonflysoul reviews
Icon Tag. SG1 finally gets Daniel back.
Stargate: SG-1 - Rated: K - English - Chapters: 1 - Words: 1,559 - Reviews: 14 - Favs: 58 - Follows: 5 - Published: 1/20/2007 - D. Jackson, J. O'Neill - Complete
Darkness Runs Deep by SGAFan reviews
Sheppard is captured by an unknown threat. Will his team find him in time? Warning: dark fic and Sheppard whumping! Rated T for now.
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 14 - Words: 40,846 - Reviews: 236 - Favs: 119 - Follows: 60 - Updated: 1/8/2007 - Published: 10/14/2006 - John S., Ronon D. - Complete
The Healing of Lt Colonels by Stargalaxy reviews
After being rescued from three months of torture, Sheppard must find his way home through himself and his friends. Oneshot. Complete.
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 1 - Words: 5,578 - Reviews: 32 - Favs: 46 - Follows: 2 - Published: 12/18/2006 - John S., Rodney M. - Complete
The Thermopylae by Tipper reviews
Searching for a crashed ship on a planet, SGA 1's luck holds true when the Wraith show up. Plenty of angst, whump and mayhem for all. TEAM fic.
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 26 - Words: 105,628 - Reviews: 550 - Favs: 109 - Follows: 44 - Updated: 12/3/2006 - Published: 10/17/2006 - Rodney M., John S. - Complete
Survival Course by b7-kerravon reviews
First season, after 'Defiant One', with spoilers for episodes up to that point. Shepwhump, pure and simple. Well, some McKay angst, too. Complete!
Stargate: Atlantis - Rated: K - English - Adventure - Chapters: 6 - Words: 16,147 - Reviews: 146 - Favs: 82 - Follows: 36 - Updated: 12/2/2006 - Published: 11/27/2006 - John S., Rodney M. - Complete
Inoculation by Alipeeps reviews
A little Shep whumpy drabble involving needles. Written for the GW Shep Whump thread.
Stargate: Atlantis - Rated: K - English - Hurt/Comfort - Chapters: 1 - Words: 1,222 - Reviews: 24 - Favs: 23 - Follows: 3 - Published: 12/1/2006 - John S., Carson B. - Complete
Through the Glass by NenyaVilyaNenya reviews
The sweat left behind as a palm print slowly fades and all he can do is stare beyond where it’s suspended, seemingly in mid air. A small smear of blood outlines where his index finger was pressed against the glass, but he doesn’t notice or care.
Stargate: Atlantis - Rated: K+ - English - Angst - Chapters: 1 - Words: 1,408 - Reviews: 10 - Favs: 7 - Published: 11/12/2006 - Carson B., John S. - Complete
Painful Reminders by obsessed1 reviews
Sheppard is forced back to active service for two months. On returning to Atlantis is the strain proving too much?
Stargate: Atlantis - Rated: K+ - English - Angst - Chapters: 17 - Words: 53,140 - Reviews: 381 - Favs: 134 - Follows: 77 - Updated: 11/8/2006 - Published: 7/4/2006 - John S. - Complete
Adrift by Alpha Pegasi reviews
Carson gets abducted, John gets desperate. Angst and whumpage ensues.
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 13 - Words: 21,484 - Reviews: 99 - Favs: 37 - Follows: 20 - Updated: 11/1/2006 - Published: 10/14/2006 - Carson B., John S. - Complete
Things best forgotten by seektheinfinite reviews
There is no such this as a simple offworld mission when John Sheppard is involved. Poor Shep gets whumped again
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 17 - Words: 28,592 - Reviews: 143 - Favs: 17 - Follows: 53 - Updated: 10/24/2006 - Published: 2/8/2006 - John S.
The Confidence Game by liketheriver reviews
Carson atones for past sins and Sheppard ends up paying the price. Radek wears the cloak of command…as well as his tuxedo, and Rodney end up with a gun pointed at him…yet again. SheppardMcKay friendship
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 3 - Words: 26,422 - Reviews: 86 - Favs: 50 - Follows: 29 - Updated: 10/18/2006 - Published: 10/13/2006 - John S., Rodney M. - Complete
Not Alone by Lauriel01 reviews
Shep whump, pure and simple. :D ...but if it was a choice between hurt and dead... well, if he couldn’t walk, he’d crawl. He wasn’t ready to die.
Stargate: Atlantis - Rated: T - English - Angst/Adventure - Chapters: 4 - Words: 9,932 - Reviews: 22 - Favs: 28 - Follows: 12 - Updated: 10/13/2006 - Published: 9/27/2006 - John S. - Complete
Sweet Dreams and Flying Machines by Dragonflysoul reviews
Tag to The First Ones A tired and emotionally worn Daniel deals with the events from this ep. REPOSTED!
Stargate: SG-1 - Rated: K+ - English - Drama - Chapters: 1 - Words: 5,289 - Reviews: 6 - Favs: 60 - Follows: 8 - Published: 9/29/2006 - D. Jackson, J. O'Neill - Complete
Of Duty, Atonement, and Redemption by SGC Gategirl reviews
The fallout from the Arcturus project might be more complicated than it seemed to be at first. Episode tag to 2x06 Trinity. Complete
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 24 - Words: 153,709 - Reviews: 647 - Favs: 310 - Follows: 98 - Updated: 9/25/2006 - Published: 8/2/2006 - Rodney M., John S. - Complete
Nothing But Sky by sazz27 reviews
John Sheppard's ordeal is finally over. Or is it? Common Ground episode tag, so beware of major spoilers.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 1 - Words: 10,356 - Reviews: 35 - Favs: 75 - Follows: 8 - Published: 9/19/2006 - John S., Rodney M. - Complete
Not An Addict by Alipeeps reviews
Her heart was in her mouth as they carried him through the gate.. A rather dark Shep whumpy fic. Written for the Sheppard HC LJ Addiction challenge. WARNINGS FOR REFERENCES TO TORTURE AND DRUG ABUSE
Stargate: Atlantis - Rated: T - English - Angst/Hurt/Comfort - Chapters: 3 - Words: 7,451 - Reviews: 118 - Favs: 37 - Follows: 86 - Updated: 9/17/2006 - Published: 8/15/2006 - John S.
Of Coloring Books and Lt Colonels by Stealth Dragon reviews
After enduring terrible torture, Sheppard becomes obsessed with a coloring book, and Rodney doesn't get it. Friendship story. NOT SLASH!
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 1 - Words: 14,675 - Reviews: 127 - Favs: 220 - Follows: 20 - Published: 9/12/2006 - John S., Rodney M. - Complete
Silence by Huggle reviews
When a simple mission ends horrifically, Sheppard is traumatised and left struggling to cope. [3906 Rating changed to T thanks, Emrys1]
Stargate: Atlantis - Rated: T - English - Angst/Adventure - Chapters: 1 - Words: 3,407 - Reviews: 14 - Favs: 12 - Follows: 2 - Published: 9/2/2006 - John S. - Complete
Honor Bound by Baroqy reviews
Sheppard is back on Atlantis after going missing for two weeks but he doesn't have a clue about what happened. Carson Beckett, Rodney McKay and Kate Heightmeyer try to solve the mystery and in the process uncover a plot that could kill them all.
Stargate: Atlantis - Rated: T - English - Angst/Adventure - Chapters: 13 - Words: 89,970 - Reviews: 306 - Favs: 84 - Follows: 54 - Updated: 8/31/2006 - Published: 8/21/2006 - Complete
Keeping The Faith by Pilgrim Soul reviews
Sheppard goes missing and his friends try to move on without him but soon Atlantis is facing a new threat. Shep whump. ShepMcKayWeir friendship. Rated for violence.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Drama - Chapters: 21 - Words: 55,313 - Reviews: 207 - Favs: 98 - Follows: 52 - Updated: 7/27/2006 - Published: 5/20/2006 - John S. - Complete
Disorientation by Kodiak Bear Country reviews
Written for the Sheppard HC challenge 2, sensory loss. An accident off world causes Sheppard to temporarily lose his hearing. Humor fic.
Stargate: Atlantis - Rated: T - English - Humor - Chapters: 4 - Words: 13,848 - Reviews: 64 - Favs: 78 - Follows: 22 - Updated: 7/11/2006 - Published: 7/7/2006 - John S., Rodney M. - Complete
Mercy by Stealth Dragon reviews
John hates it, doesn't even know it's happening to him, but pity is what's going to save his life. Shep whump. Team angst, better summary inside.
Stargate: Atlantis - Rated: T - English - Angst/Adventure - Chapters: 23 - Words: 115,548 - Reviews: 454 - Favs: 137 - Follows: 61 - Updated: 7/7/2006 - Published: 4/6/2006 - John S. - Complete
Confidence, Leadership, and Teamwork by HarmonyAk reviews
Sheppard's team is stuck on a tropical planet, and it's getting awfully hot...then it gets worse.
Stargate: Atlantis - Rated: T - English - Adventure - Chapters: 16 - Words: 33,989 - Reviews: 149 - Favs: 88 - Follows: 37 - Updated: 7/5/2006 - Published: 6/22/2006 - Rodney M., John S. - Complete
For All the Marbles by drufan reviews
There is always a price for pride. You know that includes whumpage and everyone's invited. Rated for violence, language and mature themes.
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 28 - Words: 83,237 - Reviews: 330 - Favs: 30 - Follows: 35 - Updated: 6/28/2006 - Published: 3/20/2006 - John S., Rodney M. - Complete
Restrained by Alipeeps reviews
Request fic for Kodiak Bear Country feat. Sheppy in restraints. Shep whumpage galore. Now complete.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Drama - Chapters: 4 - Words: 11,133 - Reviews: 80 - Favs: 101 - Follows: 27 - Updated: 6/27/2006 - Published: 6/23/2006 - John S. - Complete
Fever by Alipeeps reviews
Written for the Sheppard HC LJ Fever challenge. Sheppard has a fever.. a short fic composed of short chapterettes, each from a different POV. Now complete.
Stargate: Atlantis - Rated: K+ - English - Hurt/Comfort/Angst - Chapters: 7 - Words: 8,724 - Reviews: 96 - Favs: 91 - Follows: 20 - Updated: 6/20/2006 - Published: 6/12/2006 - John S. - Complete
Running on Empty by Sholio reviews
Captured, implanted with Wraith trackers, released to run and die ... such is Sheppard and McKay's fate. Now all they have to do is find each other before the Wraith find them. And Sheppard has this pesky little amnesia problem... Complete.
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 17 - Words: 94,569 - Reviews: 444 - Favs: 277 - Follows: 79 - Updated: 6/6/2006 - Published: 5/7/2006 - John S., Rodney M. - Complete
Becoming Me by PyroDragon2006 reviews
After a mysterious head injury, John struggles to rediscover his place within Atlantis, unaware that the city itself may hold the key to regaining what he lost. Warning: Rated T for some rough language. John's POV. Complete
Stargate: Atlantis - Rated: T - English - Drama/Humor - Chapters: 11 - Words: 22,865 - Reviews: 52 - Favs: 41 - Follows: 27 - Updated: 5/7/2006 - Published: 5/2/2006 - John S. - Complete
Jabberwocky by Stealth Dragon reviews
How far is John willing to go to protect? Heads going snickersnack, and genetic impossibilities. Oh, and don't forget the terrible physical trauma. John's not a happy man.
Stargate: Atlantis - Rated: T - English - Angst/Adventure - Chapters: 32 - Words: 158,257 - Reviews: 405 - Favs: 150 - Follows: 47 - Updated: 4/21/2006 - Published: 2/23/2006 - John S. - Complete
What's Left Behind by Daring Duo reviews
In this tag to The Long Goodbye, Thalan hangs around long enough to wear out his welcome with everyone, especially John. The first story coauthored by Merlin71 and Titan5.
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 18 - Words: 70,209 - Reviews: 253 - Favs: 71 - Follows: 39 - Updated: 4/20/2006 - Published: 4/3/2006 - Complete
Memories or Nightmares by Titan5 reviews
Sheppard gets an unexpected reminder of his experience with the iratus bug, followed by a hairy encounter with yet another creature from the Pegasus Galaxy.
Stargate: Atlantis - Rated: T - English - Angst - Chapters: 14 - Words: 42,355 - Reviews: 308 - Favs: 90 - Follows: 41 - Updated: 3/12/2006 - Published: 2/21/2006 - Complete
The Wishing Well by EvieMay reviews
McKay and Sheppard discover a well on an Ancient outpost with unusual results. COMPLETE Mostly John, Rodney and OC, but the gang's all there. May containg spoilers for seasons one and two. My first fanfic ever. Please review & tell me what you think.
Stargate: Atlantis - Rated: T - English - Adventure/Angst - Chapters: 16 - Words: 34,379 - Reviews: 47 - Favs: 13 - Follows: 11 - Updated: 11/14/2005 - Published: 10/27/2005 - John S., Rodney M. - Complete
Insomnia by Merlin7 M.N. Talbert reviews
The events of The Siege and Runner catch up to Sheppard. Will his friends be able to help him? Spoilers for season two!
Stargate: Atlantis - Rated: T - English - Chapters: 11 - Words: 24,895 - Reviews: 113 - Favs: 41 - Follows: 27 - Updated: 10/28/2005 - Published: 10/21/2005 - John S.
The Experiment by Titan5 reviews
Sheppard is the subject of an unauthorized experiment and he isn't having much fun. A little ShepWeir in places. McKayShep friendship stuff as usual.
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 24 - Words: 73,476 - Reviews: 587 - Favs: 182 - Follows: 51 - Updated: 10/3/2005 - Published: 8/30/2005 - Complete
The Mind of a Child by Titan5 reviews
When McKay gets Sheppard to turn on an Ancient device, something goes horribly wrong. Some comfort, humor, and friendships.
Stargate: Atlantis - Rated: T - English - Drama - Chapters: 9 - Words: 24,547 - Reviews: 152 - Favs: 155 - Follows: 34 - Updated: 8/16/2005 - Published: 8/8/2005 - Complete
Better the Devil You Know by emergencyfan reviews
The Wraith, an explosion, electrocution, and um, did I mention the Wraith? It's not going to be a good week for our boys.
Stargate: Atlantis - Rated: T - English - Hurt/Comfort/Adventure - Chapters: 8 - Words: 16,206 - Reviews: 145 - Favs: 49 - Follows: 9 - Updated: 7/3/2005 - Published: 6/24/2005 - John S., Rodney M. - Complete
Sheppard's Shame by Saharasia reviews
John continues with his recovery. Is he making progress? Where's the crew and what do they think?
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 27 - Words: 57,012 - Reviews: 146 - Favs: 41 - Follows: 21 - Updated: 6/2/2005 - Published: 10/9/2004
Samaritans by MandyK reviews
When Carson Beckett and John Sheppard go to help a planet in trouble, sea monsters and storms are the least of their worries...
Stargate: Atlantis - Rated: T - English - Drama/Angst - Chapters: 10 - Words: 18,061 - Reviews: 85 - Favs: 31 - Follows: 4 - Updated: 5/12/2005 - Published: 5/6/2005
15 Hours by Wraithfodder reviews
Did anybody really think that Major Sheppard could just walk away after all that happened to him on that planet? Spoilers for season one episode The Defiant One. COMPLETE
Stargate: Atlantis - Rated: T - English - Angst/Drama - Chapters: 1 - Words: 11,801 - Reviews: 24 - Favs: 59 - Follows: 4 - Published: 12/23/2004 - Complete
What Dreams May Come by b7-kerravon reviews
It was just a routine trading mission still, nothing is ever 'routine' with the Fab Four. Leave it to them to encounter a freak meteor storm...Guess who gets hurt? CHP 7 up, COMPLETE!
Stargate: Atlantis - Rated: T - English - Adventure/Drama - Chapters: 7 - Words: 10,425 - Reviews: 84 - Favs: 50 - Follows: 2 - Updated: 10/13/2004 - Published: 10/7/2004 - John S., Rodney M. - Complete
Regression by Sunrize reviews
As Daniel struggles to cope with his ordeal, Jack and Janet begin to suspect something more might be troubling him.
Stargate: SG-1 - Rated: T - English - Angst - Chapters: 3 - Words: 9,452 - Reviews: 11 - Favs: 13 - Follows: 1 - Updated: 5/12/2004 - Published: 5/10/2004
The Price of Our Legacy by Dragonflysoul reviews
My version of events after Evolution, Pt 1. Whumped Daniel/Awesome Jack. Action/Adventure, Drama, Angst, H/C
Stargate: SG-1 - Rated: T - English - Angst/Drama - Chapters: 1 - Words: 31,067 - Reviews: 28 - Favs: 65 - Follows: 7 - Updated: 3/26/2004 - Published: 3/8/2004 - J. O'Neill, D. Jackson - Complete
New Neighbour by Una Spectre reviews
Daniel gets a new neighbour who seems and finds him very familiar. Complete
Stargate: SG-1 - Rated: T - English - Angst - Chapters: 11 - Words: 39,864 - Reviews: 109 - Favs: 108 - Follows: 24 - Updated: 1/19/2004 - Published: 7/6/2003 - D. Jackson, J. O'Neill - Complete
Off The Edge Of My Sorrows by Yum reviews
A missing scene from the episode The Light Various POV.
Stargate: SG-1 - Rated: K+ - English - Adventure/Angst - Chapters: 1 - Words: 11,578 - Reviews: 15 - Favs: 32 - Follows: 3 - Published: 5/5/2001 - D. Jackson, J. O'Neill - Complete